UFO03510.5prime Sequence
184 bp (-97 high quality bases) assembled on 2010-02-19
> UFO03510.5prime
CAGTCGACATGCACCAGGCCTACAGTGTTCACTCGATCCTGAAACAGGGC
GTGCAGATAGAGTCAATTGCGGCATATGGCAACCTTGTCATCTTGGGCAC
CCGCAGCGGACAGCTGATCATGTACTCTGTGGACAAAGAGACGGACGTGG
ACATGCGGATGTTCAACAAGAACTTCACCCGGAA
UFO03510.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps39-RA | 2915 | CG7146-RA | 94..269 | 9..184 | 805 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18274126..18274232 | 184..78 | 460 | 95.3 | Minus |
| 3R | 32079331 | 3R | 18274283..18274353 | 79..9 | 355 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:33:31 has no hits.
UFO03510.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:49 Download gff for
UFO03510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7146-RA | 94..267 | 9..182 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:45 Download gff for
UFO03510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7146-RA | 94..269 | 9..184 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:38 Download gff for
UFO03510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps39-RA | 94..269 | 9..184 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:38 Download gff for
UFO03510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18274126..18274231 | 79..184 | 95 | <- | Minus |
| 3R | 18274284..18274353 | 9..78 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:45 Download gff for
UFO03510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14099848..14099953 | 79..184 | 95 | <- | Minus |
| arm_3R | 14100006..14100075 | 9..78 | 100 | | Minus |
