UFO03515.5prime Sequence
1120 bp (1014 high quality bases) assembled on 2009-02-03
> UFO03515.5prime
CAGTCGACATGTCCAACTACGCACCCTTTATCAAGCCCTATGTGGAGTAC
AACGAGCACGGCTGGGGTCCTTGCGAGGTACCCGAATTGGATGTGCCCTA
CCAGCCGTTCTGCAAAAGTGATCGCCTGGGCAAGATCTGCGACTGGACTG
CGATGGTGCCCGAGAAGAAGTTCCCCAGTAAATACGCCTCGACCTTTGGC
AACAACAGTCAGTACGCATACTTCTACGAGGACGATGACTCCACCTTCCA
TTTGGTGGACACCACTGGATCGAAGGCCACCAAGCCCTATCAGCGGGGAC
GCTATAGACCCAATATGCGCAACAATGTGAGGAGCAGGGGTCGCACGGGG
CGTGGCACTCCGAATATAGCAAGTCTCGGGGGATCCACGGCTGGAGGCGC
AACTGCCAGTACCACCAAGTACGGAAAGGGTCGCAATACACGCAACACGC
AGAATATGGGTCGCAGATTCGGTCGCAATGCTCCCACCAGAATCCGCGAG
AGCTCAGTGATGGTGCAATCGGATTGGGTTTCGATCGAGGAGATTGATTT
TCCACGCCTTCTCAAGCTGGCACTTCCCAATATTAAAGATGGTAAGGACA
TTGCCACCTGCGGATGGCTGGAATTTTATGATAAGTTATACGATCGAGTC
AACTTACGCAATGAAAAACCATTGCAAAAGATGGATCGTGTTGTGCACAC
CGTGACGACCACGGATGATCCGGTTATTCGTCGTCTTTCGAGGACCATGG
GCAATGTCTTTGCCACCGACGAAATCTTGTCCACCATAATGTGCTGCACA
CGCTCCAATTACTCTTGGGATGTGGTAGTCGAGAAATTGGGCACTAATGT
GTTCTTAGATAAGAGATATAATGATCAATTTGATTTGCTGACTGTCAACG
AGACTTCAGTAGAACCTCCGATGGATGAGAGGGTTCCATCAATTCGCACA
TAGCTTGCTATGGAGCCACTCTAATTAATCACACTTTAGCCAGCAGTTCT
CCGCATTGGCGACCAGAAGCCACTTTCATGTTTGAAGGAGCCAATCCGTT
TCGAGGGCCAGCTGATCTGCCTCATTGGCCTATCGCTACCGTCATGGATC
TGGCCACAAGGTGGTGCTAA
UFO03515.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4810-RA | 2232 | CG4810-RA | 60..1183 | 9..1118 | 5015 | 97.5 | Plus |
| eIF-3p66-RB | 2012 | CG10161-RB | 669..983 | 522..836 | 255 | 72.5 | Plus |
| eIF-3p66-RB | 2012 | CG10161-RB | 225..436 | 60..262 | 225 | 75.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12193960..12194952 | 996..9 | 4685 | 99.3 | Minus |
| 3R | 32079331 | 3R | 23680829..23681143 | 522..836 | 255 | 72.1 | Plus |
| 3R | 32079331 | 3R | 23680298..23680357 | 89..148 | 210 | 90 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:22:19 has no hits.
UFO03515.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:01 Download gff for
UFO03515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4810-RA | 53..1170 | 1..1106 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:28 Download gff for
UFO03515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4810-RA | 53..1170 | 1..1106 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:12 Download gff for
UFO03515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4810-RA | 53..1170 | 1..1106 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:12 Download gff for
UFO03515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12193960..12194959 | 1..996 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:28 Download gff for
UFO03515.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8019682..8020681 | 1..996 | 98 | | Minus |
