UFO03516.5prime Sequence
1125 bp (1005 high quality bases) assembled on 2009-02-03
> UFO03516.5prime
CAGTCGACATGGAGGTGCTGAAGAAGGACGCCGCCCTGGGCTCACCCAGC
AGCGTCTTCTACTTCCTGCTGCTGCCCACGCTGGTGCTTTGGTACATCTA
CTGGCGATTATCGCGGGCTCACCTGTACAGGTTGGCCGGACGACTGCCGG
GACCACGGGGACTGCCCATCGTGGGTCATCTGTTCGATGTGATTGGACCC
GCTTCATCTGTTTTCCGAACAGTCATCCGCAAAAGCGCCCCTTTCGAGCA
CATAGCCAAGATGTGGATCGGGCCCAAGCTGGTGGTCTTCATCTACGATC
CGCGGGACGTGGAGTTGCTGCTGAGCAGCCATGTCTACATCGACAAGGCA
TCCGAGTACAAGTTCTTCAAGCCCTGGCTGGGCGACGGACTGCTGATCAG
CACAGGTCAAAAATGGCGATCGCACCGCAAACTGATTGCACCCACATTCC
ATCTGAATGTCTTGAAGAGCTTCATCGAGTTGTTCAACGAGAACTCGCGT
AATGTGGTGAGGAAACTGCGTGCGGAGGATGGTCGCACTTTTGATTGCCA
TGATTACATGAGCGAGGCAACCGTGGAGATTCTATTGGAGACTGCGATGG
GTGTGTCGAAGAAAACGCAGGACAAATCGGGATTCGAGTATGCGATGGCC
GTGATGCGGATGTGCGACATCCTTCACGCCCGCCATCGGAGCATCTTTCT
GCGCAACGAGTTCGTGTTCACCCTGACGCGCTACTACAAGGAGCAGGGTC
GCCTGCTGAACATCATCCACGGCCTGACCACCAAGGTGATCCGCAGCAAG
AAGGCGGCCTTTGAGCAGGGCACCCGTGGATCCCTTGCCCAGTGCGAGCT
GAAGCAGCCGCCTTAGAGCACGAACGGGAACAGAATGGTGGTGTTGACCA
GACCCCATCACAGCTGGCAGCGATGAGAAGATCGGGAGAAGATAACGAGA
GCCAGTCCGGTGGCGGACTGTCTATGGACAGTCGGCTGTCCTCAAGATGA
CCTGGAATGCGGAAGACATGTAATTGGTGAGAAGAACCGCTGGCCTCCTT
GATTTGGTGCTCGAATGTCACGAATGAACACTCATAACGGACCGAAATAC
GACAGTGACCGAATCAGTTCGAGGA
UFO03516.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4g15-RC | 2632 | CG11715-RC | 536..1633 | 9..1092 | 4895 | 97.3 | Plus |
| Cyp4g15-RA | 2505 | CG11715-RA | 536..1633 | 9..1092 | 4895 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11481524..11482012 | 588..1065 | 1670 | 95.1 | Plus |
| X | 23542271 | X | 11478384..11478583 | 208..407 | 1000 | 100 | Plus |
| X | 23542271 | X | 11477593..11477791 | 9..207 | 995 | 100 | Plus |
| X | 23542271 | X | 11479011..11479196 | 403..588 | 930 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:14:54 has no hits.
UFO03516.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:05:00 Download gff for
UFO03516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4g15-RA | 507..1603 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:52 Download gff for
UFO03516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4g15-RA | 530..1626 | 1..1085 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:43 Download gff for
UFO03516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4g15-RA | 530..1626 | 1..1085 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:43 Download gff for
UFO03516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11477587..11477791 | 1..207 | 98 | -> | Plus |
| X | 11478384..11478581 | 208..405 | 100 | -> | Plus |
| X | 11479014..11479196 | 406..588 | 100 | -> | Plus |
| X | 11481525..11482035 | 589..1085 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:52 Download gff for
UFO03516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11371620..11371824 | 1..207 | 98 | -> | Plus |
| arm_X | 11372417..11372614 | 208..405 | 100 | -> | Plus |
| arm_X | 11373047..11373229 | 406..588 | 100 | -> | Plus |
| arm_X | 11375558..11376068 | 589..1085 | 94 | | Plus |
