UFO03525.5prime Sequence
910 bp (58 high quality bases) assembled on 2009-02-03
> UFO03525.5prime
CAGTCCACATGTCGTTTTCCAATGTCCTAATCATGCGACAGCCCGACGAA
GGCAAGTGCCACTTTTGCAAGCGTGTCTTCTGTTGCGGCATATGCCGCCA
GATTCCTCAATTCAAGGCGCACGCCATTGCTGTGCGCGAGCCATTGGGAT
TGAGGGCTGCCGGTGGCGGTATCATCGATCATCTGCATCTTTTGGATTCC
GGCGCGACCACCATCTATGTGTTCTGTCCGATCTGCGAGCGGCGTCCCCT
GCTGCTGCCCGAGGATATGCACGGTGAGCTGCTGGCCCACTTCAAGACAT
GCCTCCTGCCGATGCGATGCCGCGAGTGCCGACGCAACTACACGCGCGTC
GATGACCTGCGGGAGTTCAGCAAGTGCGTGGACCATTTTCAAAGCTGCAC
TGATGTCACCGGCGCCTCGGAAACATCGAAGGCTACGCTAAAGAAGGCAG
CGAATAGCACCGCCATTTCAACGCGAACGTCGCCGTCCGTAACGCCCATT
TCACTGATGAACATGCGCTGGAAGGCCAAGAGCCGAGTCACCCACGAGGA
GTTCATCAGCGACAGCGTCTCCTCCATACACAACCTGTCGTCGTTAGCAA
CAGCTCCATTCGTCGCTCCATTGGCCACTGGGCGTGAATCCGTCCGAAAC
GATGGAGAACGGCATGTCATACTCTCGACGTCCACACCACTGCACGTGCA
GTGCGTGTTCGCCAAGCCCAAGGAGCCGATTACCTGCAATGCGTCCTCTG
GCGGCCTCGTGTCCAGCATCTACCACGATGAGCCCAGTCCGACACCCGAA
AGCAATCCTCTCCAGCAGCAGCAGCAGCAGCAGCAGCCGTTGCAGCAGCG
CGCCTGGAAAATGGTCGCTCGCAACAGATGAGCGCGCAACGCCGCTGCGC
CAGGTCATGT
UFO03525.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fs(1)Ya-RA | 2235 | CG2707-RA | 59..965 | 9..910 | 3600 | 93.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2724443..2725307 | 51..910 | 3280 | 93.3 | Plus |
| X | 23542271 | X | 2724344..2724384 | 9..49 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:55:47 has no hits.
UFO03525.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:54 Download gff for
UFO03525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)Ya-RA | 53..965 | 1..910 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:09 Download gff for
UFO03525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)Ya-RA | 53..965 | 1..910 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:00 Download gff for
UFO03525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fs(1)Ya-RA | 53..965 | 1..910 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:46:00 Download gff for
UFO03525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2724443..2725307 | 51..910 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:09 Download gff for
UFO03525.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2618476..2619340 | 51..910 | 93 | | Plus |
