UFO03528.5prime Sequence
1148 bp (1034 high quality bases) assembled on 2009-02-03
> UFO03528.5prime
CAGTCGACATGCTGCTGGCCGCAGCCGGTCCACCGGCTTACGACGCCGGA
AAACTGTCCAACAATGCCGGATCCGGATCCAGCAACGTGGGCTCCGGCGG
AGTGGGTACGCCCACGGCGTCCTCGTCGCGTCCTAGTGCCGCTAGTGCCC
TGATGAAGACCCTGTCTGTGCGCCTGCATCGAGGCACCGAGTTCATTAAG
GACACCGTTCATAAGGCCCTGGTCATGTCCGCTCCAACGCCTGTGGCCCC
AGCTACAGCTCCTGCGCCCAAGATCGTGGACCACAGCCTAAAGCGAAAAC
TAAGCGGCGCTGGCGGGCTGATGGGCTGCAGCAGCATTGGCAGCATGACC
TCATCTATCGCCGGCAGCTCGAGAAGTCACCACTATGCACTGACTAGCCA
GGTGGCCTCGTCACAGGTGATTCCTTTGCCCAGTCAAGTGCCAACAGCCG
CCTTTCTGCGCACCTACACTGTGGCTCCCACGGCACTCCATCGATCTGCC
GCCGCTCGCAAACGGAATCCCAGCACCGACAGCCTGCTTATGGACCTGTG
CCTCTTTAAGCCCATTCGGCCCATGCCCATAACGCCAATAAAAATCCACA
AGTTCCGCGGATTTGAAGTGAAGAAACCAAAATTTGTCCCCGCTGGAAAT
CCAGACAGCGAAGATGATGAGGACAACGACGAAGATGGGACGGTCCGCAA
GCCAAAGCCCAGCAACTTGACATTGCCAACAATTTCGGACTCGGCCTTCG
TTCCGATGCCCTATATAGAAACCACCAACACCGCCATTAACGCAACCACC
ACCACTAACAGCGGGAGCAGATCCCGCTCTCTCAACACACACACCTCGGC
TCTGCCCAGGCCATAACCAAGCCAAAGCGTCGTCGTCGCGCTCCCATGCT
CACGGCCAAAAGACGACGCAAGGCCCTGGATACGGAATTAACACTTCAGC
AGATGCTGGACTGAGACAAGCTCCTGCCGTGCGCAAGCGACGGCAGCACG
CGGAGGATCCAAGCGCAGTCGAGGGAGATCGATTACGGCCCCTACCCCAG
CCGAACCATCAAATCTCCCAGTAGCAATAAAGCTCCGACCAGCGCATCCA
ACCTCTTGAGAGTGGAGCTGCAACGTAGTCTGTAGCCTCTGTGGCAAA
UFO03528.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14657-RC | 2975 | CG14657-RC | 514..1659 | 9..1143 | 5225 | 97.9 | Plus |
CG14657-RB | 2414 | CG14657-RB | 514..1659 | 9..1143 | 5225 | 97.9 | Plus |
CG14657-RD | 2888 | CG14657-RD | 514..1101 | 9..596 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4820333..4820919 | 595..9 | 2935 | 100 | Minus |
3R | 32079331 | 3R | 4819352..4819739 | 1091..711 | 1405 | 96.1 | Minus |
3R | 32079331 | 3R | 4819794..4819910 | 712..596 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:20:31 has no hits.
UFO03528.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:53 Download gff for
UFO03528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 505..1656 | 1..1145 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:30 Download gff for
UFO03528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 509..1660 | 1..1145 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:22 Download gff for
UFO03528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14657-RB | 509..1660 | 1..1145 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:22 Download gff for
UFO03528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4819295..4819737 | 713..1145 | 94 | <- | Minus |
3R | 4819794..4819910 | 596..712 | 100 | <- | Minus |
3R | 4820333..4820923 | 1..595 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:30 Download gff for
UFO03528.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 645017..645459 | 713..1145 | 94 | <- | Minus |
arm_3R | 645516..645632 | 596..712 | 100 | <- | Minus |
arm_3R | 646055..646645 | 1..595 | 99 | | Minus |