UFO03531.5prime Sequence
1158 bp (1027 high quality bases) assembled on 2009-02-03
> UFO03531.5prime
CAGTCGACATGAGTGGATATCGAGGCATTGGCGGTGGGGGCTTCCCCTAC
CGCAAGCCAGCAAGTTCCGGCAACAACATGAACGCCGTACCGCCGCCCCC
GATGCTGAATGCCCGTGGCTATTCTGGTTCCCGCGGAGGATTTGGAGGAG
CAAGCCGTGGCGGTGTCACCGGGAGCACTACATCAACGTCCAAGCACGGC
TACTCCACCTTGGACTCCATCAGCCAGTACACCAATGCCACCAATCTGGT
TGGCAAAAGGAAGCACCACACGGACGATGACTATTTCGATGATGACGATG
AGCCCCGGGAAAAGGAGATAGAACAAGCCTATATACCGGCACCAGGATCC
CCGGGAGCTCCGCCAACGTCGGCCAAAAAGCAAGAGGATTCCGATTCGGA
TGAGGATCCCCTCGAGCAGTTCATGGCGGGCATCAACCAGCAGGTGGAGA
AGGAGAAGCGTCAACAAGCACCTAAGCCGCCAACTCAGGCGGTGAGAGGT
GACATCGATGACGAGGACGATGAGGAGAGCTACTATCGCTACATGAAGGA
GAATCCCAATGCTGGACTTCGCGACGAGGGATCCGATCAGGAAATCGAAT
ACGATGAGGATGGCAATCCCATAGCCCCACCGAAGAAAAAGGACATTGAT
CCTCTGCCGCCCATCTACCATTCCGAAATCGAGTACGAACCCTTCGAGAA
GAACTTCTACACGCAGCATGACGACATAGCCGCCCTGGATGATGAGCAAG
TCCGGGAATTAAAGCGCACACTTGGCGTAAAGGTCACTGGTCCATCACCA
CCCAAACCAGTCACGTCCTTCGGCCATTTCGGCTTTGATGAGCAACTCAT
CAAGGCCGTGAGGAAAGCGGAGTATACACAGCCCACACCCATCCAGGCAC
AAGCAGTGCCACCGCCCTGTCCGGCACAGACATCATTGGCATAGCCAAAC
TGGTTCCGGTAAGACAGCAGCTTTCATCTGGCCGATGCTCATGCATGGTG
ATGGAATCAGAAACAGCTGAAGGGCAGGGCGACGGACCATAGGACTTATT
CTTAGCACTTACCACGCGGAGAGTTTCCCTGGCAGAAACTAACGAAGGCC
AGAGAGATTGGGCAAGGTCTACAACTGGAACGGTGGTCTGTGCGGTGCTC
ACGGGGGG
UFO03531.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6418-RB | 2723 | CG6418-RB | 93..1216 | 9..1140 | 5050 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10877932..10878945 | 1022..9 | 4835 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:14:51 has no hits.
UFO03531.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:50 Download gff for
UFO03531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6418-RB | 84..1130 | 1..1049 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:50 Download gff for
UFO03531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6418-RB | 86..1132 | 1..1049 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:42 Download gff for
UFO03531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6418-RB | 86..1132 | 1..1049 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:42 Download gff for
UFO03531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10877906..10878949 | 1..1049 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:50 Download gff for
UFO03531.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10871006..10872049 | 1..1049 | 98 | | Minus |
