UFO03544.5prime Sequence
1132 bp (1024 high quality bases) assembled on 2009-02-03
> UFO03544.5prime
CAGTCGACATGTTTTCAATGGACTCTTTTGCCATGGACAAGGATGCGAAG
TTGTACGAAGGAAATGCTCTATTCCGAAACCAGCCGTCGTACAAGGTGTT
CAATAAATCCTTCGAGCACGTGGACGATGCGCTGTACACATTGCTGAACG
AAGTGGAGCCAGATGTACTGCGAATGGAGCTCCAGGAAACGGGCGATCTC
TTTAAGTCGTTCAATCGCAACTCGGCCTTGAGGGATCCGCGCAACAACGA
GGTGCCACCGAAACCGACTCGCGACCTCACCACCGCCAGTTCACTCTACA
GCTTTCCCAATCCCCTGGAGCAATACTCGGAGCTGAATCTTAAGCAACAG
GCCGCCTGCATGCGAGTGCTCCTCGCCTGGCAATGCAGTCAACCCGTCGA
TGAGCAGGACATCGTGGTGTGGCAGGCAACGGAAAAGAAGCGATACAACG
AGCAGCAGCGTGTGCAGAAATACATACACGACCACGAGCAAGGACGCAAG
GAAGTCATCTACGCGCCCATGAAGAGCCTGGTGGCGGTCTACAGAAAGTG
GTACGAACTGGGTGTTAAGAAACTTCAACAAACCTACCCCAATGACTCAT
ATATGACCTTCTCCGGGCTGCCACAGCTGCCCCAGTGCAGGAGTCTCAAT
GCTCAGACCGCCAGCATAGAGCAGGTGGAGCTGGAGCGGATTGTCGGTCG
GGTAAGACTCTTGCCAGAGGTGGAAGTTCGCCATGAAGCCCTGCGGACAT
TACGACTGCGCTTGGATCGCTATGCGACGAGAGAAACAAGGGCTCCTGTG
CAGCTATTGCGGGAGGAAGACAAGGAACTGGAACTCGAAGCTGGCAACGT
CTTCGTGCTGCCCTAGACTCGCTGTTAATGCTCCTTACCACCGGATCCTA
TATTGACCTGCCCACCGAAATGTTTCTCAGCCTAAGAGAATCCGCAACAG
CAAGCACAGTGCATGGAGTTCCAGTCGCCATTCCCCCCCGCACTGTGGTT
GGCATTACGAACAGTTGATCTTTGAACCTGGCTATGGAGCTACCTTCACA
GCCCGACAAGCCAGTGGCTGGATTCATATAAATGGGAGCATTCAGCGAGT
GCCGATGGCCTGCCTGTGTATAGCTATCCATC
UFO03544.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ice2-RA | 2505 | CG10825-RA | 229..1351 | 9..1118 | 5050 | 97.7 | Plus |
| Ice2-RC | 2350 | CG10825-RC | 183..691 | 42..550 | 2545 | 100 | Plus |
| Ice2-RC | 2350 | CG10825-RC | 691..1196 | 626..1118 | 1965 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21130444..21131427 | 9..989 | 4740 | 99.5 | Plus |
Blast to na_te.dros performed 2014-11-28 21:47:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 753..814 | 480..418 | 123 | 70.3 | Minus |
UFO03544.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:43 Download gff for
UFO03544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10825-RA | 184..1286 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:46 Download gff for
UFO03544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice2-RA | 184..1286 | 1..1094 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:49 Download gff for
UFO03544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ice2-RA | 222..1324 | 1..1094 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:49 Download gff for
UFO03544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21130437..21131539 | 1..1094 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:46 Download gff for
UFO03544.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 16956159..16957261 | 1..1094 | 97 | | Plus |
