UFO03545.5prime Sequence
1089 bp (987 high quality bases) assembled on 2009-02-03
> UFO03545.5prime
CAGTCGACATGTACGCCCTGCTTCGCCGCTTTGCCGGCGTCACCAACTTG
GGATGTCCCATCAGAACCTACGCCTCCCTTACGCCCAGAGATGTATTGCG
GAGCAGCGATGAGACCGGCACACTGCTGACCCGCTTCGCCAAGCACATTG
CACTGGAGCGCTACAGGGATTCGGATCACGTGTTGCCCAAGACGACGGTC
CGGTACTCTGACTTCTTTCCCATCACGGACGACCGGTACTTTCAGCGGAC
GGTAGAGAAAACGGATGCAGCCCAATTGCCCGCCCTGATCATCCAGGCAT
CCAGCTATCGCTCCAATGCCGCTGTACCCATGTATGTGACTGCGCTTAAC
ACGTTGGATAACCATGCGGCTAAACAGCTGGACAAGATGGATACCGCCAC
AGTGCTCGAGACGCTCTACTCCTTTCTATTCCTCATACCAAGTTGGATAA
AGCGATTGGATTTTTACCAAGCAGCCATGCAACGACTGGTCAGGGAGGAT
TTTCGCGGCAACAAGGAGCGATTCGTTCAGGTGTGCTTCTATATGGGATT
GCAAAAGAAGCAGGCCAAATCTTCTGAGGAATTCCAGCAACTCCTGGAAG
AGCATCTACAAACGCATTTGCCTGAACTAAATGAAATGGACCTTGCCGTG
GTCAGCAATGCGGCGTACAAAACCTCAACTTTGGTAACCGGTGAGGCGAA
AACGGCATACGAAGCAAGACTCGTTAATGCCATATTAAATCTGGAGATAA
ACACCGGAAGCGATGCCTTGCTGGTCTCCTTTGTCAAGGCATTGCGTCTG
CAGCAAGTCAAAGATGAACGAGTGTGCCAGCACCTGCAAGATATCTGTCT
GGATCCTGTAAAGATACCCATATTGAACCCCGAGGACTTGCCCATATCTT
TGCATTCTTTGCCGAGCAGCTTTGGGATCAGAATGAATGCCTAACTTTCG
TCGTAAAACGACTCATGACTCTCTTCAGCCTGGAGACCTGCCGCTCCAAG
AACTGGCCACATTCCTGGGGGGCCAGCGCTCCACTCATTTGTGCATTGAA
TCCTGGAGAATCGACATTGGACCTGACGCCCTGGCCAAG
UFO03545.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4619-RB | 1923 | CG4619-RB | 98..1181 | 5..1083 | 5010 | 98 | Plus |
| CG4619-RA | 4136 | CG4619-RA | 98..1181 | 5..1083 | 5010 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9938960..9940011 | 5..1055 | 4890 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:12:43 has no hits.
UFO03545.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:42 Download gff for
UFO03545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4619-RA | 92..1160 | 1..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:52 Download gff for
UFO03545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4619-RA | 94..1162 | 1..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:43 Download gff for
UFO03545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4619-RA | 94..1162 | 1..1066 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:43 Download gff for
UFO03545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9938956..9940024 | 1..1066 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:52 Download gff for
UFO03545.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9938956..9940024 | 1..1066 | 98 | | Plus |
