UFO03558.5prime Sequence
1112 bp (996 high quality bases) assembled on 2009-02-03
> UFO03558.5prime
CAGTCCCTTTTTTCATGAATCACTGAAGCTGATCTCCCTGATGCTGCTGT
GGGTCATTGTGGCTGCTTTTCTGACGGATTGCGAGGCCAGGAGCCTTGTG
GACAGGTCCGAAAATTCCGATAGCAATGGTAGCTCGACCAATAGATCCGC
GGCAGAGTACCAACTGCAGGAATACGCGGAATTCATGAAATCCTATATGA
ACCAAAGTGTAGAGCCCTGCGAGAATTTCTACGAGTATGCCTGTGGAAAT
TATCGGAACGTAAAGCCGGATCGGTACTCACCGGGCAGTAGAAGCAACCT
GGGCGACGTGACTTACACACTGATCGACATCACGGAGCAACTGCTGGGCA
GAATGGATCTGGCGGAGGCTCTAAACGTATCCAGCGAACTGGCGGTGGCC
CAGCGATTCTACAACGCTTGTCTGGGAGCAAATCTCCATCCTTTCAATGC
GGCGGATCCCGCTTACTTGAGTCTAATTCGATCGATTGGAGGATTTCCCG
CTGTGGATGGAGACGCCTGGAAAGCCTCAAACTTTAACTGGATCAACATG
AGTGCTCATCTGGCCAACTATGGCGCCAACGGTCTGATCCGCGAAACTCT
CCAGTTAAGGTATCCCTTTGAGCCCTACACCAAACTGCCCGAACTGGGCT
TCGATCACATCATCGTACATGAGGAAAACATTTCCAGAAATACCACACGC
GCCTTTCGCCTGAACGAAGAGCGAATGCACGGATATCTGAGGGCGTTCGG
CTTGCCGGAGGACAGGATTAGGGAGGCCATCGCTGGGGTCTTTGCCTTCT
GGCGGGACGCACTCGAGATCCCGCCCCAGTGCGAAGTGTTTGATCCCTAC
CGAATTAAGCGAGTGTTTCCCCAATCGGAGTACTACTATAACATCTCGTG
CAGTGACTCACTCCACTAACAAATTATTCTGCGACTTTACTACGTGAACT
GGACAAAGTATGCGCCGACATCGCAGCTGTGCCACTACCTGGCCATGAAG
CTGCCCTATAGAATTCGATCCCAACCTGAGGCGCCAGGTTACAAAGGGAC
TACTGTCGTTACGCTTATCAATTCATGGCGTTCGTTTCACAAATCTTCAC
ATGCTACACCCT
UFO03558.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8358-RA | 2197 | CG8358-RA | 33..1112 | 11..1077 | 4905 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9675555..9676581 | 11..1029 | 4620 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:14:44 has no hits.
UFO03558.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:41 Download gff for
UFO03558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8358-RA | 33..1114 | 11..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:47 Download gff for
UFO03558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8358-RA | 33..1114 | 11..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:39 Download gff for
UFO03558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8358-RA | 33..1114 | 11..1080 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:39 Download gff for
UFO03558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9675555..9676636 | 11..1080 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:47 Download gff for
UFO03558.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5501277..5502358 | 11..1080 | 97 | | Plus |
