UFO03565.5prime Sequence
1144 bp (1013 high quality bases) assembled on 2009-02-03
> UFO03565.5prime
CAGTCGACATGCCCTGTGCGATGGAGCTGCCCAGCACGCCCGATGAACTG
GCCGCCCAGCAAGCGGACAGCGCTGCACTCAAGGACTTGCTCAAGGATCC
CAGTCGTTGGCACTCGATTCCCCTGCTCAACTACACGCCTCTTCACAAGC
TGAAGGATCAGACTCTGGTGCGCTTTCGTGGAATGATCCAGGACATGATG
GACCCAGAAATCTATCTGGAGCGCTACGAAGTGAAATCCGCCGACGGCAG
CAAACGTGTACAGGAAGGAAAGTACAGGGACTGCTTGAAAATAGCCAATG
GCGAAGTGATTGACTACAACGCCGATGGAAACGTGCATGGAGAGAGGCGT
ACCATGTTCGTGGTCTCTGTGCCTGGTCTGAACGATTGGAGCAAGGAGCA
TGAGAAGCTGTGCTGTCCCCAGATCGATTTGGCCAGTCTGGGTCAATCTC
CCAGTTCAGCCAAGAAGCGGACTATTGTAGGCGAAGAAGAAGCCATGGAT
GTGGACGTTGCGAGCGAAACAACGTTCAAGCGACCCTGCCTAAAAGAGAT
TCAAAAAGATAGCGAGCCAGTCGGCGCCTCCAAATCCTCTGTTCTTGGGT
CTGATTACCTGATTAACTCGCCTCTGCCGGATCGTCCCAGCATGGCATGC
ATGGTAAAGGTTTACGAGGAGTTCGATACCTACCAGCTTAACTCGCTGGT
CGACTTTGTGGGCTTTCTGTCAGTGGATGCTTCACTAGACGCCGCTACCC
TGGAAATAGACGATTGTGAAAACTTGAGTGAACTGCAGGCAGCTCATCCA
TCGCCATTTCTTATACCCCGCCTGCATGCCTTCGGAGTCCAGGTGCTGCC
GCATGCCAATCCGCTGCTGGACAAAGCCTTCGACAACCAACGGAAATATG
TGAGGAGACGTATCCAACCCACCTTGCTGTGCACAAGATCTGCGCATGCT
TCTTAAACTCTGCCTCTTTGATGACGATCTGGCTGCCGAAGTATTTGCTC
CTCCCACTTATAATCTACGTCTACAGTCGGTCTGAGATGCGAGCATCGGC
AGGTCCGCCCTTAACCTTTGTAATCTCCCTTAGAATTGTGAGAGGGTATG
CCACCAGGTTGATTCAATTCTGGAGCTGCTACTGCGCCAGACGA
UFO03565.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3430-RA | 1973 | CG3430-RA | 91..1219 | 9..1135 | 5265 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6957098..6958226 | 9..1135 | 5065 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:04:53 has no hits.
UFO03565.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:30 Download gff for
UFO03565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3430-RA | 89..1225 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:43 Download gff for
UFO03565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3430-RA | 91..1227 | 9..1143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:06 Download gff for
UFO03565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3430-RA | 91..1227 | 9..1143 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:06 Download gff for
UFO03565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6957098..6958234 | 9..1143 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:43 Download gff for
UFO03565.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6957098..6958234 | 9..1143 | 97 | | Plus |
