UFO03567.5prime Sequence
1113 bp (1016 high quality bases) assembled on 2009-02-03
> UFO03567.5prime
CAGTCGACATGACGAAAGTAACGCCGAAAGGGCGCCCGAAGGCTAAGACG
CCGTACAAACGCTACTTCGACGGCCAAAAGGACACAGAAACGGGCGACGG
CGATCTAAAACATGTAAAAGTGTTCAGCAAAAACCGACAGAATTTCACTG
GCGATTTTATCAGTATGATTAATAAAACGAAGAAGCCGCGTCCCCAAAAG
GCTCCCGCCAAACCCACAAAGGAGGAGCTGGAAGCTAGGCCCAAGAAGAA
CCCGATTCCCAAGGAGATCCTCGACAAGTACTCACGTGGCGAGCAAGTGC
AGCCGAAAGGTGTGAAAACGCGGCACTTCAAGGAGCAGCAGACGCGCAAG
GAGGTCTACCTCGAATACGCCACCGAGCAGGCGGCCCGCACAGAGCTCCT
ACTCCAGGAAACCGCTGGGCAGCTACAGGCAGATGAGGGCGAGACCACCG
CCGAATTTAGACAGTCCCAAATTGCCGAGAATGTGGATATCCAGTCATCG
GCCAAGCACTTCAACCTGAACATGGAATTCGGTCCTTACCGAATGCGCTA
CACCAAGAACGGCAGGCATTTGCTGCTCGGCGGCAAACGCGGTCATGTGG
CCGCCTTCGATTGGGTGACCAAGCGTCTGCACTGCGAATTCAATGCGATG
GAGAGCGTCGAGGATGTTCAGTGGCTGCATGTGCCCACCATGTACGCGGT
GGCCCAGAAGAGCTGGGTCTATTTCTACGACAAAAAGGGCACCGAACTGC
ATTGCATCAAGCGGCTGAATCGGGTCAATCGCCTGGACTTCCTGCCCTAC
CACTTCCTCCTGGCCGCCGGCAACAGTGCGGGCTATGCTTCCTGGCTGGA
CGTCTCCATTGGCGAGCTGGTGGGTAACTTTAACACGGGACTGGGCGATA
TACGCATGCTGCGACACAATCCCCGAAATGTGTACTCCTGCATTGCGGCG
GACGTTGTGTGTGTCCATGGTGGTCGCCAAAGTGGCGTGAGCCGCTGGCA
CAGCTCCTGGTGCCATTCGACAGCCATGTTCTGCCTCTGGCGGGGGAACC
CAGGGCCAGTATTTGTTACGGCTTGCTTTGGATTGGCGTGTAACGATGGG
AATCCGAATGCTG
UFO03567.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2260-RA | 2004 | CG2260-RA | 117..1186 | 9..1078 | 4990 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8119976..8121031 | 1065..9 | 4740 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:23:08 has no hits.
UFO03567.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:29 Download gff for
UFO03567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2260-RA | 83..1166 | 1..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:08 Download gff for
UFO03567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2260-RA | 110..1193 | 1..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:59:43 Download gff for
UFO03567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2260-RA | 110..1193 | 1..1086 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:59:43 Download gff for
UFO03567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8119955..8121038 | 1..1086 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:08 Download gff for
UFO03567.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8013988..8015071 | 1..1086 | 97 | | Minus |
