UFO03574.5prime Sequence
1130 bp (1020 high quality bases) assembled on 2009-02-03
> UFO03574.5prime
CAGTCGACATGAATCGGGTTAAAAGAATATCTAATTACTTTGACTCTATG
CTACCCCTGATCGATAATATTTTGCAAGTAGTGAATCAGATCTTCGATGA
TTACACTTCCTTTGATGGCCAAAAGCTCATGCACTTATACCACCTCATTT
ACAAGCAGTGCGCGGCGGAGCGCAATTGGAATAATCCAGCCCAGAAGAAC
GGGAGAAGTCTTTACATTGTGCTATCCGACTGCCTGATGAAGCGACTAAA
AAACATAGCATGGGTAATGGAGAACCAACTCGACGACAACAAACCAATTC
GACTGATCGCCAAATATTTAGAGCACTGGGTACCCTATCAAAGGTCATGT
GAGAAACTGAACCTAGCTTGCTACCACTTCAACCGCAACTGGGTGGAACG
GGAGCGGCTTAAGGGAGACAAAGAAACTTATCCGATATATCGCTTGGCCA
TGATTAGCTGGAAGGAGCTGGTCTTCGAGCCCAGCGTCACGATTCTCGCC
GCCATTAGGCTGATTTTGAGTCAGATGCCCAGGGAATACAATAAATCATT
GGAATACCAAGTATACCAGGTGCTCCAATCCATTGTGGAACTGTACGCCA
ACGATAAGTACCAAGATGTGTCCTTGCCTTCTAGGATAGACAAAATTTTC
ACTGAGAAGGTGATGGATTTCTACAAGTCAACGACGTTGCACGAATTCCA
AAAGATCGTCGTATCCAATGACTACAAGGATTTCAAGCATTTCCTTAGGT
ACGCATGCCTAGCCATGCCAGAAATTGAGAATGGGACACAATTTAAGGCA
ATACTAAAAAGATACCTCGCTGCGAGGCTGCAGGAGACGAGGCTGTCAGC
AAGGATTATATCCAAGCCTTCTTGGGACTTTGTCGCGGTCCTTTGCAGCG
AGCATTGCGGGACCACACAAATTGGCGGAAGTCGTGATGCGTGTGCAAAG
AAGAAATATAGAAAGGCAGATATTGACCCCACCCGTCTGCTTGTCCATAT
GCCCACGAACTTATGACCAAAAGGCAGAGTCGAGGAGCATTATGATGAAC
TTAAACGAATCGTAAATGCGTGAGTTTTAGCGAGAATACAATTAATGAAT
GTATTTGGAAAGCCCTTCGGATTCGCCAAT
UFO03574.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11261-RA | 2215 | CG11261-RA | 117..1259 | 9..1129 | 5070 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13010541..13011569 | 1027..9 | 4700 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:55:45 has no hits.
UFO03574.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:24 Download gff for
UFO03574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11261-RA | 108..1255 | 1..1130 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:22:06 Download gff for
UFO03574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11261-RA | 112..1259 | 1..1130 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:59 Download gff for
UFO03574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11261-RA | 112..1259 | 1..1130 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:59 Download gff for
UFO03574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13010425..13011574 | 1..1130 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:22:06 Download gff for
UFO03574.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13003525..13004674 | 1..1130 | 96 | | Minus |
