UFO03582.5prime Sequence
1097 bp (990 high quality bases) assembled on 2009-02-03
> UFO03582.5prime
CAGTCGACATGCTGCACTCCGAATTATTGCCCCCCGCTGGCCACCAGGGC
ATCTATGCTCCACTAAGTCAGGCAATGAGCGATTCTGAATCCGACGAGGA
AATTGAGATCCACAACGCCGCCAATCATCGACAAAAATTGCAACAGAAAC
TTAAGCAAGTTCATCAGCCCAGTCCGCCGGAGCAGCTCCAAGCCCAAAGG
ATACGCATCCCGCCGAACACTCTAGCCCTGAAATCACCACATACGAGAGC
ATCTCCCACGGCCACCAGGATTGTGACTCGAAAACCTTCCGGGAGTACCC
AGAAATTCCAACTGGAGGGCAGTAGCTACGCTACCAATATGCAGAATACT
TTCCGTTCCGTCATGTTGAGCGATAATGGTGGAGTGGGATCGGAGTTGTC
CCACTTCAACAGTGATTTCGATGCGAATGCAGACAATGTAGCCATCTTGG
GGGACCATAATCAGACCGGCGAGGATTTGTCCAAAAGAACCCCCATGTCA
CCGGCAAGGAAATGCTGTTTCATAGGCAGCCTGCTCCTGTGCTTCCTCGC
CGTCGTATCCTTTGTATGGCTGGTGCCCTGCGGTAATCCTGATGGCACTG
GATCCTGTCCAGCCGTCGGAGACCGGATAAAGACCCACAACTGGTTCAAT
AATTACACAAAGGCGGAACTTAAGGGAGGAATCAATGTGGTCGGTGGTCT
AAGAGCCTGGGAGAACAACCTGATATTTATGTACCGCGGGGATGCCTTTT
TCCCGGAATTCCGACCAGGTAACGAGCGGCGTAATGGCATCATCTGTTTG
ATTGGCTCCTCGGGAGCTGTGGCTTGTTTGTGGAGATGGTTGATGAGCCT
GTGGCCCTGGACTGCACCCTCATAGACATAGATGGCAATGGGAAACCAGC
TTGCTTGTCACTGGATGAGTATGGCGAACTTGGAGCCATTCATCCCGTCT
CTGGTGAATGGATCTGTGGCATAAGAGCGATCAGCCCGAAAGTTGATGCC
TATGAACTTCCCAGTTATCCTGCCCTGATCTGGATGCAGATGGAATGCTG
CGACCTCCTGCTAGTGACTAGTTGTCATTGTACACGCCTAATCGCTG
UFO03582.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3618-RB | 2559 | CG3618-RB | 113..1178 | 9..1073 | 5095 | 98.9 | Plus |
| CG3618-RA | 2589 | CG3618-RA | 143..1208 | 9..1073 | 5095 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20814734..20815799 | 1073..9 | 4920 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:21:27 has no hits.
UFO03582.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:27 Download gff for
UFO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3618-RA | 140..1227 | 9..1091 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:50 Download gff for
UFO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3618-RA | 143..1230 | 9..1091 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:37 Download gff for
UFO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3618-RA | 143..1230 | 9..1091 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:37 Download gff for
UFO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20814704..20815807 | 1..1097 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:50 Download gff for
UFO03582.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20807804..20808907 | 1..1097 | 97 | | Minus |
