Clone UFO03591 Report

Search the DGRC for UFO03591

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:35
Well:91
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptl(2)k05819-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03591.5prime Sequence

1128 bp (1039 high quality bases) assembled on 2009-02-03

> UFO03591.5prime
CAGTCGACATGTGGATATCCATGAACCTGTGGGGAATAGCTCGATTGCAG
TGTTTTCTAAAGACGCCTCAGGCTGCGTTGGAAAAGAGTACAAGCAAATC
GTTCGAAGAGGACCTGGACACGCCCTCGTACGACTATCAGAATATGTCCA
TGCTTCGTTCCAGTGTGCTCCGCATCTGGATGCAGCTGTGGCGTGGTGAC
AGTGAACTCCTGCCGCGCTCAGCCAATCTGGTACAGGTGCTGGGGTCCAT
TTCGGCGCTGTGCTGCGTGGACAAGAAAGGTATCCTGTCGTGGCCCAATC
CCACCGCCGAAAAGGTATTCTTCCTGCACAACACAGACGAGGAGGCTCGC
GAGGATGGAGCAGGCAGTCAGTCTTCTTCACAGAGCGAGAGCGACGACGT
ACCGGTTGTGGATGAGGACCACAAGGAGCGCGGAATAGTGGCTGAAGTGC
TGGACCTCACGCACGACCAACACTGCCCCTTTCGGCTGGAGTTCGACGAT
CACGAATGGAAGGCGCACATCAAGTCCTTGAAGCCACTGGGTCTTGCCAT
TCTGCTAAACACCTGTTCTCCACTCACCCACGAGCACTACGCACAGTTCT
GCGGTCATGTAACCGCGGTGGCTATGCTCGACAAAGATCTGGTACCTGTG
ACTAATCGGTATGCGTATGCACTCATTGAGTCCAGTAAAAGCTTTTTGCA
TGGACGCTGCCTTTGCGAACTGGCCAAACAGATTGGATTCACCGACCATG
CCACTGATCGGTTCGCGCTGGAGGGTCAATTGGCTAGCTATCGCCACTTG
CAACCTGATGTTGTGCGAAGGGACATTCGTTTCGCCCGGCAGCTCCAGCT
GTCCTCAAAGGTGAAGGTCCCATTCCCGCACTCTTTGTCTGTGGTCATGC
GCGAGATCCAGCGGCTATTTTATCACCTTCTCACCCAGGGAACAGCAGAC
ATTATACTGGACTGCTGCGATGACTTTTGGGACGGCATTGATCTGCGACC
AATTGTCCGCACAGGATCGCAAGCGTGCACTGACTTTTATCAGCCCAGCG
CGCTGACGTCTTATTGTACGCGTTTGCTATACAGCATTCCTAAGGCACGC
ATCAATGGAGTCCTTACGGTCTTCTAAC

UFO03591.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:52:03
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)k05819-RA 4864 CG3054-RA 1111..2225 8..1121 5155 98 Plus
l(2)k05819-RD 5201 CG3054-RD 1111..1761 8..658 3255 100 Plus
l(2)k05819-RC 4819 CG3054-RC 1111..1761 8..658 3255 100 Plus
l(2)k05819-RD 5201 CG3054-RD 1761..2180 703..1121 1680 94.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:52:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4395418..4395952 8..542 2675 100 Plus
2L 23513712 2L 4396968..4397237 800..1069 1010 94.9 Plus
2L 23513712 2L 4396009..4396172 540..703 820 100 Plus
2L 23513712 2L 4396809..4396906 703..800 490 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:52:03 has no hits.

UFO03591.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:14 Download gff for UFO03591.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)k05819-RB 114..1193 1..1080 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:34 Download gff for UFO03591.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)k05819-RA 1106..2185 1..1080 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:22 Download gff for UFO03591.5prime
Subject Subject Range Query Range Percent Splice Strand
l(2)k05819-RA 1106..2185 1..1080 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:22 Download gff for UFO03591.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 4395413..4395950 1..540 99 -> Plus
2L 4396010..4396172 541..703 100 -> Plus
2L 4396810..4396906 704..800 100 -> Plus
2L 4396969..4397250 801..1080 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:34 Download gff for UFO03591.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4395413..4395950 1..540 99 -> Plus
arm_2L 4396010..4396172 541..703 100 -> Plus
arm_2L 4396810..4396906 704..800 100 -> Plus
arm_2L 4396969..4397250 801..1080 95   Plus