UFO03614.5prime Sequence
1122 bp (998 high quality bases) assembled on 2009-02-04
> UFO03614.5prime
CAGTCGACATGGACGAATCGGTGCGATATGACCGCTGTCACCAGGTGCAG
CTGGGCGTTTTCAACGAGTCGCAGTTGTCTTCTGTGGAGGAGGACGTGCA
GAATCTGCCTCAGCAGGGAACGGGAAACATCCTCTTCACCCACGACGGCG
TGCTTCTGAAGAAAGCCAGTGCGGAGCACATCGCGGATCTGAACACCAGC
GGCTCCCTTTCCTTGGTGGAATATTCGCGATCCATCGCGGAAATGCCCCG
TAGGAGACTGTTGCTCGAGTGGCAGCCCAATGACAGTATCATGATTGCGG
ACGACAGCCAGGATCAGGGAGACTGGGCGCTGGTAGACAGGATTTCCGGG
CGAACACGCACCACATCCGAGTGCCGTGCCTTCAACACTAGACCCATTGA
ACCGAGCGGTGGAGCGACCACCCGTTCGCGAGTCATGCGTGCCCAACTGG
AAGATTTGTCTTCTGTAGAGGTGCGCCATCGCGGACAGACGATCCGTTTT
ATGCGGAAAGGGGCTAATGGCGTCCACAGCGAGTTCTTTTTCCAGCATGG
AAACGCAGACCTATTTGTGCGCTCCATGCGCGATCAGCACCTAATCGAGA
ACGCCGAGACTAGTCGCAGTGGCGGCGAGGTGTATGCCATATTGACCACC
GAGAACCAAAAATTGAAAAAGACGTTTGCTGAACTTGACATTGGCCAGAT
TAAGGCAAGCCAATTGCCACGTGAGAGCTGGCTGCCCAACAAGCTGGCCG
GAATCCTGGGCAACATTCCCGATTACGTACAGCCTCCGTTCCAGCGTTCG
CCCAAATCTAGGCCGGGAGTCTTGATCTCTGGCGATCGGCAGACTTCACC
GGACAATTATCAATAATTGGGCTAAGTGGCAGCACCAATAGTGCCTGTTC
CTCAAACGGACAGTCTCGTGGGGCAGTGCAGAGAGTCTCCCGCGACAGCG
AGCTGGAAACTCTTATGCCAGGACGAAAATAGGTACACTGGCCGATCGCA
GCGGGTGGGAGGGGAGGTCATCCCTACGGAGACGCGATGGCTAGAGTTTC
GGACGCGACGGCGGATTCGGATGGCGCGGAATCAGGACTCTACTCGCGGG
GCGGGCGTCCTGGCAAGGCTGG
UFO03614.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tbc1d15-17-RC | 3121 | CG11490-RC | 106..1166 | 8..1056 | 4820 | 97.8 | Plus |
| Tbc1d15-17-RB | 3129 | CG11490-RB | 333..1393 | 8..1056 | 4820 | 97.8 | Plus |
| Tbc1d15-17-RA | 2902 | CG11490-RA | 106..1166 | 8..1056 | 4820 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 207707..208551 | 125..965 | 4010 | 99.4 | Plus |
| 2L | 23513712 | 2L | 207511..207631 | 8..128 | 605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:20:27 has no hits.
UFO03614.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:04 Download gff for
UFO03614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11490-RA | 109..1090 | 1..979 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:28 Download gff for
UFO03614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tbc1d15-17-RA | 102..1083 | 1..979 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:20 Download gff for
UFO03614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tbc1d15-17-RA | 102..1083 | 1..979 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:20 Download gff for
UFO03614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 207507..207631 | 1..128 | 97 | -> | Plus |
| 2L | 207711..208567 | 129..979 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:28 Download gff for
UFO03614.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 207507..207631 | 1..128 | 97 | -> | Plus |
| arm_2L | 207711..208567 | 129..979 | 99 | == | Plus |
