UFO03617.5prime Sequence
1135 bp (1030 high quality bases) assembled on 2009-02-04
> UFO03617.5prime
CAGTCGACATGGACATGATTACGGTGGGGCAGAGCGTCAAGATCAAGCGG
ACGGATGGCCGCGTCCACATGGCCGTGGTGGCGGTGATCAACCAGTCGGG
CAAGTGCATCACAGTCGAATGGTACGAGCGCGGCGAAACGAAGGGCAAGG
AGGTAGAACTGGACGCCATACTCACGCTCAATCCGGAGCTAATGCAAGAT
ACTGTCGAACAGCACGCCGCCCCGGAGCCCAAGAAACAAGCCACCGCGCC
GATGAACCTCTCGCGTAATCCCACACAATCGGCTATCGGTGGCAATCTCA
CCAGCCGTATGACCATGGCCGGAAACATGCTGAACAAGATCCAGGAAAGC
CAGTCGATTCCCAATCCGATTGTCAGCAGCAATAGCGTGAATACAAACAG
CAACTCCAACACTACGGCCGGCGGAGGTGGTGGCACCACAACGTCGACGA
CCACTGGATTACAGCGTCCACGGTACTCGCAAGCTGCTACCGGCCAGCAG
CAGACAAGGATCGCCTCGGCGGTGCCTAATAACACATTGCCCAATCCCAG
CGCGGCAGCCAGTGCTGGTCCGGCGGCACAAGGAGTCGCCACTGCGGCCA
CAACCCAGGGAGCTGGCGGCGCTAGTACCCGGCGATCGCACGCATTGAAA
GAGGTGGAGCGACTGAAGGAGAATCGCGAGAAGCGACGCGCCCGACAGGC
CGAGATGAAGGAGGAGAAGGTGGCGCTGATGAACCAGGATCCGGGCAATC
CAAACTGGGAGACGGCGCAAATGATACGCGAATATCAGAGCACGCTGGAA
TTTGTGCCGCTGCTCGATGGCCAGGCCGTCGATGACCATCAGATCACAGT
GTGCGTGCGCAAGCGTCCCATTAGCCGCAAGGAGGTCAATCGCAAGGAGA
TCGATGTCATTTCGGTGCCGCGCAAGGACATGCTCATCGTGCACGAGCCG
CGCAGCAAGGTCGACCTCACCAAGTTCCTGGAGAACACAGTTTCGCTTCG
ACTACGCCTTCAACGAACACGTGCGACAATGCCATGGTATACAAATAAAC
AGCCAAGCGGTGGGTGAAACATTTTCAAGGGCGAATGCGACTGCTTCGCC
CAATCGCGAACGGATCGGGCAACCACACAGGGGCG
UFO03617.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:55:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Klp10A-RF | 4467 | CG1453-RF | 431..1529 | 8..1100 | 5250 | 98.9 | Plus |
| Klp10A-RC | 4543 | CG1453-RC | 507..1605 | 8..1100 | 5250 | 98.9 | Plus |
| Klp10A-RB | 4754 | CG1453-RB | 718..1816 | 8..1100 | 5250 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11134880..11135917 | 1044..8 | 5050 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:55:33 has no hits.
UFO03617.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:04:03 Download gff for
UFO03617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp10A-RD | 225..1309 | 1..1083 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:21:58 Download gff for
UFO03617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp10A-RD | 333..1417 | 1..1083 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:52 Download gff for
UFO03617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Klp10A-RB | 712..1796 | 1..1083 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:52 Download gff for
UFO03617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11134880..11135922 | 1..1044 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:21:58 Download gff for
UFO03617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11028913..11029955 | 1..1044 | 99 | | Minus |
