UFO03631.5prime Sequence
1128 bp (1030 high quality bases) assembled on 2009-02-04
> UFO03631.5prime
CAGTCGACATGTATCTGAACCACCTGCCGCGGACACAATGGAAGTACCTA
CAATACCTTCTGCGAGTGCGTCAGCTTCAGCTCCTGCGACGGCACGTTAA
CATTGGCGCAAAGCCGCCCATCCAAACAGCTGCCTTGCTGCCGGCATTGG
GCCAAAAACTGAGGAAGCACTCGCAGCTGGTGAACGGAGATCTCCAAGAC
AAGTTTGGCGTGCCACGGGAACAGGATGCTCTTCTAACCCGACTGGAGGA
GGCCAAGACGGGTAACCAGATTTTAGATGTGTTGGAGAGCTGTGACGGCC
TGCAGAGCTCCCATGTGGTGATGGGAATCTCACTGCTGTGGAACATCTAT
CACGACGCGGAGCAGGCAAGTAAAGATGCCATCACGGATCGCGTGCTGCT
TAACGTGCTCCCAAAGTTGGCCCCTTATGTACACCAACTGGAGATCGATG
ATCTCAGTAGATGCTACCTGTACCTGCGCAAAATGCATATACCAAACTCC
GAGGCAGTCGTGGAGGCCGTGCTGACGAGATCTCTTCAATTAATCGAGTC
ACAAGTTGATGACGAAGTCATTCCCTTGACCTCCTTGTCTCGCCTCTCGG
TGGGCATCAACTTGGAACGCGACTTCTTCACTCCGCTTGTGTGTAGGAAC
TTTATTCCGCACCTGGAACATCACATCAATTGGTGTCGCAGCGCAGAGCA
GGTTCGCCTTCTGTCCACGTGCCTCTTTCAGCTACACTTTCTCATTGATG
AGGAGCTGTTTACGCGCTTCAAGTTGCGCTTGACTGAAATGATGCAAAGC
GGCGTCCTCAGCAGCGAAACCCCTACGCTCTTCTGAAGGTGATCCACATG
CTGAATATTCCAGTGTGGTCGCAGACCCACACCCAATTGATTCGGGAGGT
CATGCTGGTCTTGCGACCTTGCATACACCAGATGGAGTCTGCAGATCTAA
AGAGCATTTGTCGCACATTTTTGCATCATCAGAACCCGCCGCACTGATAG
AGCCGCTCAAGAAAGCCCTTGAAAGTTACTACAGGAGAAGACTGCTGACG
CCCTGTTTTGGGTGTCTTTGCACGCCCTGCAGAGAAACAGTATCCTCGCA
TCAGTTAGACTGCTCTTACTCGGAAGAG
UFO03631.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31643-RB | 2842 | CG31643-RB | 86..1220 | 8..1128 | 5165 | 97.8 | Plus |
| CG31643-RA | 2938 | CG31643-RA | 86..1220 | 8..1128 | 5165 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6038202..6039260 | 8..1060 | 5015 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:49:53 has no hits.
UFO03631.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:22 Download gff for
UFO03631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-RA | 36..1100 | 1..1060 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:28 Download gff for
UFO03631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-RA | 36..1100 | 1..1060 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:10 Download gff for
UFO03631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-RA | 80..1144 | 1..1060 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:10 Download gff for
UFO03631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6038196..6039260 | 1..1060 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:28 Download gff for
UFO03631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6038196..6039260 | 1..1060 | 99 | | Plus |
