UFO03640.5prime Sequence
499 bp (20 high quality bases) assembled on 2009-02-04
> UFO03640.5prime
CAATCCACATGTATTGAAACCTTTAGGCGGACTATCGCCACCAGAATTGA
TCCATATATTACTGTATTGAGGATCTGCATCATCTAAGAGGACTCCGCTC
GTCTCGCCAAACAGAGGCCCCCGACCCCGATCTCGCCCTCTGCCTTCACA
TCAAGAAGGCGGTGGACGCGGTCCTACTAATGCGTCTACTTTTTTTTCGG
GTCTACTCTACGAGTGCTACCAATGTCAGAAACTGGGAAAAACAGGGGGC
AGCGCTGCGGGAGCGGGAGCGAGTGAAGGAGCTGTCTGTCCTGGCGGAAA
TCCGGTCACCTTCCAATTTGACAACGCCCTGTGGCTGTGCCTCAAGTGCG
GCAGCCAGCTGTGCGGGAGGGCACGCCACAAGCACTCCTTAAAACACTAC
CGTACACCTCATTCGGACTCACATGCCCTGGCCATGAATACGCGCTCCTT
CGACATCTGGTGCTATGAATGCGACATGAAAATCTGCTCCAATCTGCGC
UFO03640.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4165-RF | 4454 | CG4165-RF | 218..693 | 25..499 | 1440 | 87.2 | Plus |
| CG4165-RE | 4093 | CG4165-RE | 170..645 | 25..499 | 1440 | 87.2 | Plus |
| CG4165-RB | 4066 | CG4165-RB | 143..618 | 25..499 | 1440 | 87.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5422638..5423015 | 25..401 | 970 | 84.4 | Plus |
| X | 23542271 | X | 5423119..5423214 | 404..499 | 450 | 97.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:06:01 has no hits.
UFO03640.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-07-30 09:15:15 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 22:33:23 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:47:39 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:39 Download gff for
UFO03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5422760..5423017 | 147..403 | 91 | -> | Plus |
| X | 5423119..5423214 | 404..499 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:23 Download gff for
UFO03640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5316793..5317050 | 147..403 | 91 | -> | Plus |
| arm_X | 5317152..5317247 | 404..499 | 97 | | Plus |
