UFO03641.5prime Sequence
1148 bp (1032 high quality bases) assembled on 2009-02-04
> UFO03641.5prime
CAGTCGACATGCGGCGCAGTCTGGCTCCCAGCCAACGTGGACCACTGCGT
CCCGAGTCCCGTCACTCCTTCACGCCGCCACTGCTGAAGAAAAACAAGCG
ATCCTGCCAGCAGGAACTGGAGCGAGAGCAAGAACTGGACAGAAGACGAC
TGGGCGCCCTCCGAGATGCCAGCAACACATCAGAGCTCCCACTGCCTATT
CGCTTCACGGCGAACAGCGAGTATGAGTTGGCCATTGCCAAGGTTCTGGC
ACGGAAGTTCAAGGTGCCCATGGACAATTACGTACCGGATTACGGTGGTA
AACGGGTCCTGGGCGTGCGGCGCTGCATTTCCCGACGACCCCTACACGAT
CCGATGGCCTGCAACGCCTTGGTACTCTTCCATCCACCCGCCTACACAGA
ACACGAGCGCATGGGCATGGATCCGACCAAGGTTCTGGTGCACGTCGTCG
TCGATCCGCTGCTGAGCAACATATTGCGGCCGCACCAGCGCGAGGGAGTG
CGTTTCATGTACGAGTGTGTGGAGGGAAAGCGGGGCAACTTCAATGGATG
CATCATGGCCGACGAAATGGGTCTCGGGAAGACGCTGCAGTGCGTAACGC
TGGTCTGGACACTTCTAAGGCAGGGGCCCGAGTGCAAGCCGACGATCAAC
AAAGCCATTGTCGTGTCTCCATCATCGCTGGTTAAGAACTGGGAGAAGGA
GTTTACCAAGTGGCTTCACGGTCGACTCCTTTGCCTGCCCATGGAGGGCG
GGACCAAGGAGAACACCATCCGAGCACTCGAGCAGTTCTCCATGACTTCT
GCCCGGCTGGGGACACCTGTTCTGCTCATCAGCTACGAGACATTTCGCAT
CTACGCGGAGATCCTGTGCAAGTACGAGTGGGAATGGTGATATGCGACGA
GGGACATCGCCTCAAGACAGCGACATCTGACGTATCAGCTCTCATGGGAC
TGAAGACAAGCGACGGTCTTGCTTTCCGGCACTCCCATCCAGACGATCTT
ACTGAGTACTACAGCCTGTGAACTTTGTAACCCGAATGCTGGGAACGCGG
CCGGGTTAACGCCACTTCAAGCCTATTCTGCGGGCCAGAAATACTGACTC
AGGAATCGGAGACTGACACACATCGGGTCATTAGAAGAACAGGAACAC
UFO03641.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| okr-RA | 2878 | CG3736-RA | 51..1159 | 9..1100 | 5045 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2991623..2992650 | 1030..11 | 4740 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:32 has no hits.
UFO03641.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:15:14 Download gff for
UFO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| okr-RA | 46..1168 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:35 Download gff for
UFO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| okr-RA | 44..1166 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:32 Download gff for
UFO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| okr-RA | 44..1166 | 1..1105 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:32 Download gff for
UFO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2991537..2992650 | 11..1105 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:35 Download gff for
UFO03641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2991537..2992650 | 11..1105 | 97 | | Minus |
