UFO03644.5prime Sequence
1134 bp (1055 high quality bases) assembled on 2009-02-04
> UFO03644.5prime
CAGTCGACATGGCCGACGATGCCGGCCAGGACAAGCGAAAGCAGCACCGC
GCCCGCCAGTCCGGCGTGAAGGCGGACAAGAAAAAGCTGAAGGCCAAGAA
GGACTCCAACCAGAAGGAGCCCGAGTTGACCGCCAGGCAGAGGAATCCCA
AGGCGTTCGCCATCAACTCGGCGCAGCGAGCAGAGAGGAACTTCCGGCGC
AAGGAGGACCTTACGGCCAAGAAGCAGCATATTCCGGTTGTCGATCAAAC
TCCGAACGTACCGCCACCCGTACTGATTGCCGTGGTGGGACCACCCAAAG
TGGGAAAGACAACGCTGATCAAGGACCTAATTAAAAGCTTTACGCGGACG
AATGTCACCGATATAAAGGGTCCCATTACTATTGTGACCTCCAAGAAGCG
CCGGATTACCCTGCTGGAGTGCAACAACGATGTGAACTCCATGATCGATG
TGGCCAAATGCGCCGATCTGGTGCTGCTGCTCTGCGACGCAAGCTACGGC
TTCGAAATGGAGATCTTTGAGTTCCTGAACATCTGCCAGGTGCACGGCAT
GCCCAAGATAATGGGCGTACTTACCCACCTGGACATGATCAAGAACCCCA
AGCAGCTGAGGAAACGAAAGAAGGAACTGAAGCACCGCTTTTGGACGGAA
GTCTACGATGGCGCCAAGCTATTCTACCTTTCTGGACTTCTTCACGGCGA
GTACCTCCGGAACGAAGTCAAAAACCTGGGACGATTTATCTCTGTGATGA
AGTTTCGCCCGCTGCAGTGGCGAGGTGCACATAGTTATCTGCTGGTAGAC
CGCATCGAGGATGTGACAAACACAGATCGCGTGCGCCGAGATCCTAAGTG
CGATCGCGAGGTAGTACTCTATGGCTATGTCCGAGGAGTTCCTCTCAAGC
AAGAACACATGGTGCACATAGCTGGCCTGGGGGATGCCCGCATCGACGAG
TTAAACGTCATTCCCGATCCTTGCCCCTGCCTGGGACGGAAAGAGCGAGT
TTGCTGGAAAAAGAGCGATTACTGTATGCACCATGTCCGGATCGGTGGCA
TTGTTTACGACAGGATGCTGTCTACATGAGTCGGATCGCACTCGCACAGA
ACAGAACAACGCTGAGCGCCGAAGGCGACTGGGA
UFO03644.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:47:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7728-RA | 3675 | CG7728-RA | 104..1205 | 9..1098 | 5205 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:47:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17016639..17017714 | 9..1077 | 5035 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:47:40 has no hits.
UFO03644.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:02 Download gff for
UFO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7728-RA | 78..1195 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:40:03 Download gff for
UFO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7728-RA | 96..1213 | 1..1104 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:58 Download gff for
UFO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7728-RA | 96..1213 | 1..1104 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:58 Download gff for
UFO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17016631..17017748 | 1..1104 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:40:03 Download gff for
UFO03644.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17009731..17010848 | 1..1104 | 98 | | Plus |
