UFO03659.5prime Sequence
974 bp (98 high quality bases) assembled on 2009-02-04
> UFO03659.5prime
CAGTCGACATGATGCTGCTCCGCCTGACTTTGCTGACCGCCTGCTGCCTC
TGCGCCGCCCAGGCGGTGTTGCACGGCAAGGATGTGAAGCGCCGCGAGGC
TTGATTCGACACATACGGTCCGCCGCCACGCCCAGCCCCCCAGTACGGCC
CACCGGCACACCATCACCACGTGCCCCACCGGGAATACCGTTTGCCGCAA
CAGATTCCCTTCAGGGAGTACGGTCCGCCGTCCATCAAATACGGCCCACC
CAATCTGAACTTCCTGGGAGGCGGCGGAGGAGGCGGTGGTGGCGGTAGCT
CGCTGCACAAGCAAATCAAGACCCACTTCGGAGTGCCCAAGCCCTTCTAT
GGACCCCCGCACATCCAGCACAAGCCGGCACAGCAGTACGGTCCACCACC
ACCGAAGCCTGCACCACAATACGGTCCACCCCCGCATCCTGCCCCACAGT
ATGGTCCACCACCACCGAAGCCGGCGCCTCAATATGGTCCACCACCAACA
CAGTACGGTCCACCGCCGCCATTGAAGATCCAGCACCGCCCGGCTCCACA
ATACGGACCACCGAAGCTTCAGTACGGTCCACCACCACCACCGCAGCTGT
TGCCCTCGCCACATGCCGCACCACTCTTCAAGCCCGCCCACCACCCAGCC
ACCTCGTACAGACCACCTGCCTCCGGACCGCTGAATCTGCCGCCCAAGCA
GATCTTCGATGCCCCGCCACCGAACTACAGACCACCACCACTGCCTGTGT
CCCTGCCCGGCAACGGAAACGGACCAGCCGCATCGATTATCGTGACGGGT
GGGACACTCCAAGCCAAGTGGACCCAGTGGTCCCGGACCAGTGAAGCAGG
TGCAGATCGAGATCGACTACTCGGGACACACACACTGTTGTTAGCGGATC
ACAAGCTCATTCCACACGGACCTGCGATGGCTGGAAACCTGATCCCGCTG
CAGTGGGGAGCCTACGTGGAGCAG
UFO03659.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9411-RA | 3684 | CG9411-RA | 311..1274 | 8..974 | 4235 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14474893..14475853 | 974..11 | 4080 | 96.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:19 has no hits.
UFO03659.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:18:00 Download gff for
UFO03659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9411-RA | 297..1267 | 1..974 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:37 Download gff for
UFO03659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9411-RA | 304..1274 | 1..974 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:13 Download gff for
UFO03659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9411-RA | 304..1274 | 1..974 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:13 Download gff for
UFO03659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14474893..14475858 | 1..974 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:37 Download gff for
UFO03659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14368926..14369891 | 1..974 | 95 | | Minus |
