UFO03667.5prime Sequence
1153 bp (1026 high quality bases) assembled on 2009-02-04
> UFO03667.5prime
CAGTCGACATGCTGGAGGAGATGCAACAAATGAAGACCATTCCAGTGCTG
ACCAATTCCCGCCCGGAGTTTAAGCAGATACCTAAAAAACTCAGCAGGCA
TTTGGCCAATTTGGGAGGTCCACATGTGGATTCCTTCGACGAGATGCTGA
CCGTGGGACTGGATAACTCGGCCAAACACATGATCCCGAACCACTGGCTG
AGTCCTGCCGGCGAAAAGATTTCAATGAAAGTAGAATCAATATGGATAGC
GAAGCCAAAGGTGCCGCAAGATGTGATTGATGTGCGCACCCGAGAGATTT
ACCCCACGGACTCCAGGCAGCTCCATGTCTCCTACTCGGGAATGTGCTCG
GTCCGATTGGGGTGGAGTGTCAATGGAGTGCAAAAGACTCCCATAAACAT
GGACCTAGGAGAAGTGCCCATCATGTTGCGCTCCAAAGCCTGCAATCTGG
GACAGGCTACTCCGGAAGAAATGGTAAAACATGGAGAGCACGACAGCGAG
TGGGGGGGCATTTTTGTGATCCGAGGAAATGAGAAGATTGTACGTATGTT
GATCATGACCCGGAGGAACCATCCCATATGTGTAAAACGTTCATCCTGGA
AGGATCGTGGACAGAATTTTAGCGATTTGGGTATGTTAGTGCAAACGGTC
CGTGAGGACGAATCATCCCTGAGCAATGTAGTACATTATTTAAACAATGG
AACTGCAAAGTTTATGTTTTCTCACGTCAAGAGACTATCATACGTACCAG
TTTGCCTGATCCTCAAGTGCCTAATGGATTATACAGATGAGGAAATATAC
AACAGATTGGTGCAGGGCTACGAGTCCGACCAGTACTATGTGTCCTGCGT
GCAAGCCATGTTGAGGGAAGTTCAAAATGAAAACGTCTATACGCACGCCC
AGTGCAAGAGCTTCATTGGCAATCTGTTCCGTGCCCGCTTCCCAGAAGTT
CCGGAATGGCAACGGGATGATGATGTCACCAGAACTTTATTCTTAAGGAG
CGAGTAATGATTCACTGGATACCTTATGAAGAATAGTTCCAGTTGATGGT
GTTTATGATTCAAAGCTTTTCAATGCGCACAAGCAAGTACAAGGTGGAAA
ACGTCGACTCAGCCTATGATGCAGGAGGCTTCTGCAGCATCCTATCGAAT
CCT
UFO03667.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpI135-RA | 3564 | CG4033-RA | 98..1228 | 7..1135 | 5275 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 404535..405563 | 98..1126 | 4620 | 98.1 | Plus |
| 2L | 23513712 | 2L | 404382..404473 | 7..98 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:27:39 has no hits.
UFO03667.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:20:06 Download gff for
UFO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpI135-RA | 91..1227 | 1..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:20 Download gff for
UFO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpI135-RA | 92..1228 | 1..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:23 Download gff for
UFO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpI135-RA | 92..1228 | 1..1135 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:23 Download gff for
UFO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 404376..404473 | 1..98 | 95 | -> | Plus |
| 2L | 404536..405574 | 99..1135 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:20 Download gff for
UFO03667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 404376..404473 | 1..98 | 95 | -> | Plus |
| arm_2L | 404536..405574 | 99..1135 | 98 | | Plus |
