UFO03675.5prime Sequence
1114 bp (1039 high quality bases) assembled on 2009-02-04
> UFO03675.5prime
CAGTCGACATGGGTTTAACTAAACAATATTTGGCCTACCGGGCTATAGAC
AGCTTTAATATCATCACCTCCGGCCGCGCCAATGTGAACTTTGCCGTTGT
GGACAAGACAGAGGGTCGATATGTGGCCGCTCCAGCTGCTGAAAATGTGA
TCGTGTGGGATTTGCGAATGGGCGATCGCAAGCTGACGCTGCGCCGCGAA
AAGTTCGAGGTCACCTCCCTGAGGGTCTCGCCAGATCACCTGCACATTGC
CGTTGGCTATGCGGATGGCATGGTGCAGATCTTCGATCTCAGCTCGGACA
GGTACTACGATCCCATCTGTACGCTGGCACTCCACAAGAACGCTGTTAGC
ATCCTGCGGTACGATTTGCAGGGCATGCGTCTGGTGAGCGGAGGCCTGGA
CACCGAATTGGTGGTCGTCGATGTGGTGGAGCAGGCGGGAAGAGCTCGAT
TGAGTGGCCACAATGCCGCCATCACGGACGCCCATTTCCTGCAGCGTCTG
GTAGACGAGAGCATAGTGGTAAGCTGTTCGAAGGACACGCAGATCAAGTT
CTGGAACCTGGAGACGCAGTTCTGCTTCAAGACAATCGTGGATAACCGCA
CCGAAGTCTGGGCACTGGCCTTTATTGGGAATCTAATGGTAGCTGGCGCC
GGCGAAAGCGGCATGAATGTCTACCGCCTGAGAAAGCACGACGGTGCCAT
CACTGAAACTCTGGAGTCTGCAGTTGAAGGCCTGTCTATTGATGACGAGG
ACACCATCAGCCCCATTAGCGTGAGCAACTGCGGCACCATCCAGCGCGCT
GGAAAGGGCCGCACCGTCAACCTGGTGACCGATCCCAGTGAACGCGTGAT
CAGCTGCCACGGCACTAATGATCTAATCGAGAACTTCTACATCTGCACGC
CGGACGAGGTAAAGAAACGACTGGCTAAGCGTCTAAAGAAGAGAAAAAGG
TCGCCGAAGATGAGGATCAGACGAAGCAAACTGTCACGGAACATCGCTGA
CGATGAAATCAGCGACTGGAAAGCATCTGCAAGCAAAGATCAAGTCCATA
GATGTGTTGGGCAACCAGAACTGCGTGTCTGTAATTGGCAACACGTCGGC
CTGAACGCTGGAGG
UFO03675.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8064-RA | 2901 | CG8064-RA | 75..1133 | 9..1056 | 5020 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18283955..18284856 | 166..1056 | 4000 | 98.6 | Plus |
| 3R | 32079331 | 3R | 18283734..18283891 | 9..166 | 790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:27:30 has no hits.
UFO03675.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:20:03 Download gff for
UFO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8064-RA | 68..1140 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:14 Download gff for
UFO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8064-RA | 68..1140 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:18 Download gff for
UFO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8064-RA | 70..1142 | 1..1062 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:18 Download gff for
UFO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18283729..18283891 | 1..166 | 97 | -> | Plus |
| 3R | 18283956..18284865 | 167..1062 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:14 Download gff for
UFO03675.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14109451..14109613 | 1..166 | 97 | -> | Plus |
| arm_3R | 14109678..14110587 | 167..1062 | 98 | | Plus |
