UFO03676.5prime Sequence
1122 bp (1030 high quality bases) assembled on 2009-02-04
> UFO03676.5prime
CAGTCGACATGACGCTGCTCACATCCTCGCTGCTGCTCTTTTCGCTGCTG
ACGTCGCGGCTCGAAGCAATTCCGGTTTTGGAGAAGTCCCCCGCCCATCC
TGCCCACTCTGCACATCCCGCACATCCCGCACATCCCGCACATCCCGCGC
ATCCATCGCCTGGCGTGCGAATTCTTCGCGCACCCGAATCTTTGGTGGCG
CCCCTGGGAGACGAGGTGGTGCTGGAGTGCGAGACCAGTTTGCAGCCAGA
GCGCTTCGAATGGAGCCACCGGTCCAGCAGATCTCCGGGAGCGGGGTTCA
AGTACCTTAAGACAGGCACGGCCAAAGCGAATGTCTCCCAGGAGGCGGCC
ATCTCGCGACTGAGGGTGCTCGTCCGACCAGACACTCTAGGCGAGTACCG
ATGCGTTGGCTGGTTCGGTCCGCTGGTGGTCACGTCTACCATTGCTCGAT
TGGAGCTGGCCAGCACTAGCCTGGTGGACGCTCAGGAATCGGAATCACCC
CTCCAATGGCGGGTGTCTGCTGGAAACTCTGTGCTCTGGTCCTGCGGACA
ACAGGTGCAATCGAATCCATCTGCCAGTTGGTCCTACTATCGAAACGGAG
TGGAAATCAAACCGGAGTTCATCGGAACCAATGGAAATCTTTTTCTAAGC
AATGTATCCTCCGAGTCGTCAGGCAGCTATTCCTGCCAGGCAACCAATCC
TGCCTCTGGCGAGAGAATTCAGCTGCCCGGCTCGCTGCAACTACAGGTTA
CACCAGAGCAGAGGTCGGAGAGTAAATCTCCACACTTGCTCACGGGACAG
CCGAGCTCCCAAGAAATTACCATACGCGAAGGGAGTTCGCTGTTGCTGCT
GTGTCCTGAGTTGGCTCACCGCCACCGACGGTTGTCTGGAGCAGTCCCGA
TGTCGTGGGAGCTGTTAAGACAGCGTTCGAAAGTATTTGGACACGCTTTG
GAGATATCCAACACCCGAGTTAATGATGCTGGCACCTATATTTGCTTTCA
GATAATGGAGTGCGGCCTGCGTTAGAACACTACATAAAGTGCATGTCGAG
CAGCGGCCTCAATGTGGGACCACCCTGGGCGATCTACCACGAGGGCGAAC
GTTTGAGTGGGAGGTAAGGCCA
UFO03676.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ihog-RA | 3276 | CG9211-RA | 327..1452 | 9..1122 | 5255 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6947335..6948413 | 1080..9 | 5040 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:15:43 has no hits.
UFO03676.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:20:02 Download gff for
UFO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| iHog-RA | 290..1421 | 1..1121 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:50 Download gff for
UFO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ihog-RA | 320..1451 | 1..1121 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:55 Download gff for
UFO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ihog-RA | 320..1451 | 1..1121 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:55 Download gff for
UFO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6947289..6948418 | 1..1121 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:50 Download gff for
UFO03676.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6947289..6948418 | 1..1121 | 98 | | Minus |
