UFO03690.5prime Sequence
1150 bp (1022 high quality bases) assembled on 2009-02-04
> UFO03690.5prime
CAGTCGACATGGAGTTGGTGAAACGCGGGTTCCTGCGTGCGTGCAAGAAC
CACAGCTACCTCAGCTTCGAGCTGATCGATGATATCCTGGCCCCGCTATG
TGCCAACCACAAGACTACAAAGCCCGGCAGCAAGGAGGCGATTAGGGCAC
TGGTGGCGGAGATTAATGACACCATCAGCGACTTGGGCCAGTTGCTGGTC
TTCATCAAGTATCCGGTCAAGGCCGAGGAGTACCTGGTTTACGCCAAGAC
GGACGCTACGCCGGACAGCGTGGCCAACACCGGGCTCACTGCCGAGGAGT
GTCAGTACTTTTCGAAACTGCTGGACAAGATCGCCTCCGAGGAGGACTGC
CACATCGCCTGGAATGACGCCTACAATGATATCGTCCTACAGGCCAGCTC
GAAGCCGTTGAAGAAGAGCCGCATGCAGGAGCTGCTCCAGAAGTGGATCC
AAATGGGCTACTTCATGGAGGTGACCGACAGAATCTACCTAGGTCCACGT
AGCCTCGTCGAGCTCAGTTTCTATTTGAGCTCGAACCACGCCGATAACAT
AAAAAACTGCACGCTGTGCAAGTGCCTGGTGTTGTGGGACATTCGCTGCG
GGTCCTGCAACATCCAGTACCACCGCGGGTGCATCCAAACCTACTTGCAG
AGACGCGATATTTGCCCCTCCTGCGGCAACCTATGGACAACTCCAATAAG
ACGCTCCATTGGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGT
CATTACTGGATCTATCACAGGAGTCAGCGAGCTCGATATCAATACGCCCG
CTGCACTCATCGCAGTACTGTGTATCATAGCATCTGCGACTGAGCATCCC
ACGCATGATGACTGATCGCAGCGCATCAGACCTTGTCGCTGCTATATTTT
GCCATGTGAACGGGCAGATTGCAATTGGCAGTATCAACTGTACTCACAGA
TGCTAACGAAACATTCTACCTAGCACATGCAGCTTCACGTACGCACTGCA
UFO03690.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nse1-RB | 977 | CG11329-RB | 78..782 | 9..713 | 3525 | 100 | Plus |
| Nse1-RA | 887 | CG11329-RA | 78..782 | 9..713 | 3525 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6676844..6677548 | 713..9 | 3525 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:51:23 has no hits.
UFO03690.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:38 Download gff for
UFO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11329-RA | 51..771 | 1..722 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:24 Download gff for
UFO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11329-RA | 70..790 | 1..722 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:58 Download gff for
UFO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nse1-RA | 70..790 | 1..722 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:58 Download gff for
UFO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6676836..6677556 | 1..722 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:24 Download gff for
UFO03690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6676836..6677556 | 1..722 | 98 | | Minus |
