Clone UFO03691 Report

Search the DGRC for UFO03691

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:36
Well:91
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03691.5prime Sequence

1131 bp (1032 high quality bases) assembled on 2009-02-04

> UFO03691.5prime
CAGTCGACATGCTCGTCTCAGGTGCCGACGAAGTAGTCAAGGATATAAAA
CAGCAAAACGACGAGCTGGGCAAACGCGGTAGCATTTTTGTGGAAGCGCC
TAGAGCAAGTCGTCGCCGAAGCTTTTATAATTTCTTTTTGCGTCATCAGG
ATGCTGTCGATGACAGCTTAACCTCACCTTCAGTACATAGAAAAACCGCA
ATGAACAACACGACCAACACCACCTCAAACTCCGCCTCCACCTCCGGCAC
GGCCTCCTCCACCGCCACCGCCCCAGCCACTGGGTGTGGCCCAGCAGCCA
CCTCCGCCTCCGACAGCGACCGACACCAGGCGGTGGGGGGTGGGTCGGCT
CCATCACGTAAGCGCGCCTCTAGTTTCATTCGCAAGAAACCGCCCCTAGA
AAGAGGTTTGTCAGCACAAAGCGCTTTAAGAGTAAACAAGAACGCTTTTG
TCTCTGAGGCGTCAGCCCCCGAGGTGATCGTCACCAGGCCGTCGCCAGAG
CAACAGACGCATCCGCACTCGCTGAGCCTGCGTCCGGACAACGCAACTCT
GGTCCACGTACTGGTACACCGCGAGAGCGAAGAGTATAAGGAGGAGGATG
AGAGCAGCCCGTCCGTGAGCGGCAACGGAAATGGTTTTGGTGTCGGCCTG
GACATGCTTAGCAAGCAGCCGCCGCCTCAGATACGCATCACAACGGGCTC
GGTAGAGAGCTCAATGGACACGTGCGCGATGCCCACAGTTCAGATCATGG
TGGACAGTCCGAAGGACCCGCCACGAGGCGATTTCAGCTCAGCACCGATT
GATGATGTGGGTGCGCCAATCGATGTGAATGTCCAGGGCGATACTTCGCA
GTGTTTTACGACTATAATCCTGAGAAAGCCACCGATGACCAAGGGAATGG
ACAGGACGAGACAGCGCAGTTCGAATCACTTCCAGACAGACAGAGAGCAG
CTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAGTGTCATAATCAT
ATCATAATCATATCATAATCACACTAGCCTAAGGAGTCCTGGTCATGACT
AGTGCTGATTCTCACAATAAAAACGCCGGCGCCACGAGCGTTCTGAACAA
TTCAGAGTGGAGTTCTGGAGGTCTATACTGG

UFO03691.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:37
Subject Length Description Subject Range Query Range Score Percent Strand
NaCP60E-RP 11475 CG34405-RP 8413..9351 9..946 4670 99.9 Plus
NaCP60E-RO 12475 CG34405-RO 9413..10351 9..946 4670 99.9 Plus
NaCP60E-RN 12573 CG34405-RN 9511..10449 9..946 4670 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24917648..24918141 454..946 2420 99.8 Plus
2R 25286936 2R 24917320..24917577 196..453 1290 100 Plus
2R 25286936 2R 24916771..24916890 76..195 600 100 Plus
2R 25286936 2R 24915395..24915462 9..76 340 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:15:36 has no hits.

UFO03691.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:35 Download gff for UFO03691.5prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RC 7925..8869 9..952 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:44 Download gff for UFO03691.5prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10455 9..952 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:52 Download gff for UFO03691.5prime
Subject Subject Range Query Range Percent Splice Strand
NaCP60E-RN 9511..10455 9..952 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:52 Download gff for UFO03691.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 24917320..24917577 196..453 100 -> Plus
2R 24915395..24915462 9..76 100 -> Plus
2R 24916772..24916890 77..195 100 -> Plus
2R 24917648..24918141 454..946 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:44 Download gff for UFO03691.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20802918..20802985 9..76 100 -> Plus
arm_2R 20804295..20804413 77..195 100 -> Plus
arm_2R 20804843..20805100 196..453 100 -> Plus
arm_2R 20805171..20805664 454..946 99 == Plus