UFO03692.5prime Sequence
692 bp (575 high quality bases) assembled on 2009-02-04
> UFO03692.5prime
CAGTCGACATGGCCGATGAGAAGAAGAAGGTTAAGAAGAAGAAGACCAAG
GAAGAGGGTGGTACTTCCGAAACCGCTTCTGAGGCCGCATCCGAGGCAGC
AACCCCGGCACCAGCTGCCACTCCTGCCCCGGCCGCATCTGCCACTGGTT
CGAAGAGAGCGTCGGGCGGATCCCGTGGCTCCAGGAAGTCGAAGCGCGCT
GGCTCCTCGGTCTTCTCTGTGTTCTCCCAGAAGCAGATCGCCGAGTTCAA
GGAGGCCTTCCAACTCATGGATGCCGACAAGGACGGTATTATTGGCAAGA
ACGATCTGCGCGCTGCCTTCGACTCCGTCGGCAAGATCGCCAACGACAAG
GAGTTGGACGCCATGCTGGGCGAGGCCTCGGGTCCGATCAACTTCACCCA
GTTGCTGACCCTGTTCGCCAACCGCATGGCCACCTCCGGTGCCAACGATG
AAGACGAAGTTGTTATTGCTGCCTTCAAACATTCGATAACGATGGTCTCA
TCGACGTGACAAATTCCGCGAAATGCTCATGAACTTCGTGACAAGTCACC
ATGAAGAGTTGATGATGCCTACGATCAGATGGTGATCGACGACAAGACCA
GATCGATACCGCCGCCCTGATCGAGTATGCTCACCGCCAAGGTGAAGAGA
GAGAGCCGCCCCAAGCTTTAGACATTCGTTTGGCCGCGGCCA
UFO03692.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mlc2-RA | 2286 | CG2184-RA | 65..713 | 8..649 | 3010 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30173019..30173414 | 642..253 | 1590 | 97.5 | Minus |
| 3R | 32079331 | 3R | 30173571..30173815 | 255..11 | 1225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:27:22 has no hits.
UFO03692.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:34 Download gff for
UFO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc2-RA | 59..716 | 1..653 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:06 Download gff for
UFO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc2-RA | 59..716 | 1..653 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:12 Download gff for
UFO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mlc2-RA | 59..716 | 1..653 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:12 Download gff for
UFO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30173027..30173412 | 255..634 | 97 | <- | Minus |
| 3R | 30173572..30173822 | 1..254 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:06 Download gff for
UFO03692.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25998749..25999134 | 255..634 | 97 | <- | Minus |
| arm_3R | 25999294..25999544 | 1..254 | 98 | | Minus |
