UFO03693.5prime Sequence
1119 bp (1005 high quality bases) assembled on 2009-02-04
> UFO03693.5prime
CAGTCGACATGGCCGAGTACTTGGCATCCATTTTTGGCACGGAAAAGGAC
AAGGTGAACTGTTCGTTCTACTTCAAGATCGGCGCCTGCCGCCACGGCGA
CCGGTGCTCTCGCATCCACAACAAACCCACTTTCTCGCAGACGGTGCTTC
TCCAAAATCTATACGTGAACCCCCAAAACTCCGCCAAATCCGCGGATGGC
TCCCATCTGGTGGCCAACGTCTCCGACGAGGAGATGCAAGAACACTACGA
CAATTTTTTCGAGGACGTGTTCGTAGAGTGCGAGGACAAGTACGGGGAAA
TCGAGGAGATGAACGTGTGCGACAACCTAGGCGACCATCTGGTCGGCAAT
GTGTACATCAAATTCCGTAACGAGGCTGATGCGGAAAAGGCGGCAAACGA
TTTGAACAACCGGTGGTTCGGTGGTCGACCGGTGTACTCGGAACTATCGC
CGGTGACCGACTTCCGCGAGGCTTGCTGTCGGCAGTACGAGATGGGCGAA
TGTACCCGCTCCGGCTTCTGCAACTTCATGCACTTGAAGCCCATCTCGCG
TGAGCTGCGAAGGTACCTCTACTCCCGCCGCCGTCGTGCCCGCTCCCGTT
CCCGATCCCCTGGACGCCGTCGCGGCTCCCGCAGCAGGTCCCGATCCCCG
GGTCGAAGAGGAGGCGGCAGAGGCGACGGTGTCGGCGGAGGAAACTACTT
GAACAACGAGCGGGACAACATGCGTGGCAATGATCGCGGAAACGATCGCG
ATCGCCGCAAAGGTGGTGGCGGAGGAGGCGGTGGTGGTGGTGGACGGTAT
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAC
GAGCGTTCTGAACAAATCCAGATGGAGGTTCTGAGTCATTACTGGATCTA
TCAACAGGGTCCAAGCGAGCCTCGAATATCAATTAGCCCGCCCTGCACTC
TATCGCAGTACTGGTTGTAATTCATTAGCATCTGGCCGACTGAAGCATCA
ACGCCATGATGAACCTGAA
UFO03693.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| U2af38-RB | 1655 | CG3582-RB | 197..989 | 8..800 | 3965 | 100 | Plus |
| U2af38-RA | 1261 | CG3582-RA | 197..989 | 8..800 | 3965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 293625..294372 | 800..53 | 3740 | 100 | Minus |
| 2L | 23513712 | 2L | 294440..294485 | 53..8 | 230 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 23:27:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4569..4606 | 524..487 | 118 | 78.9 | Minus |
UFO03693.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:33 Download gff for
UFO03693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2af38-RA | 188..995 | 1..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:00 Download gff for
UFO03693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2af38-RA | 190..997 | 1..808 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:07 Download gff for
UFO03693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| U2af38-RA | 190..997 | 1..808 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:07 Download gff for
UFO03693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 293617..294372 | 53..808 | 99 | <- | Minus |
| 2L | 294441..294488 | 1..52 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:00 Download gff for
UFO03693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 293617..294372 | 53..808 | 99 | <- | Minus |
| arm_2L | 294441..294488 | 1..52 | 92 | | Minus |
