UFO03694.5prime Sequence
1156 bp (1025 high quality bases) assembled on 2009-02-04
> UFO03694.5prime
CAGTCGACATGAGCAGATTGGGCTTTGAGCAATTCCCGGACTACCAGGTG
CCCGGCATGAAGCATCCTGATTTCTCGCCCTACGAGTCCAATGGCGGCTC
CATTGTGGCCATCGCCGGAGATGACTTTGCCGTAATTGCAGCGGACACCC
GCCTGAGCAGCGGCTACAACATTCACTCGCGAACGCAGAGTAAACTCTTT
AAACTCTCGCCCCAGACAGTGTTGGGTTCCGCAGGCTGCTGGGCGGACAC
GCTCTCGTTGACCGGATCGATTAAGGTGCGCATGCAGAGCTACGAGCATA
CCCATCTGCGCACCATGACCACTGAGGCCGTGGCCCAGATGCTCTCCATC
GCCATGTACAATCGCCGCTTCTTCCCGTACTACGTGTCGAACATTCTGGC
TGGAATTGACAACGAGGGCAAGGGCGTCGTCTACTCCTACGATCCCATCG
GTCACTGCGAGAAGGCTACATACCGCGCCGGCGGCACTGCCGGCACCCTG
CTGCAACCGGTGCTGGACAACCAGATTGGTCACAAGAACATGAATTTGGA
AGACGCCGACAAGATCAAGTTAACCAAGGAGCGGGCCGTGAGCGTTGCCT
CCGACACCTTCATCTCTGCCGCTGAGCGCGACATCTACACCGGCGACTCT
GTGCTGATCAACATCATAACCAAAGATGGAATTGAAGTACGAACTCTGAC
GCTGCGTCAGGACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGG
TCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATTATCAAATT
ACGCCCCCGCCCTGCCACCTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGAAATGGAAGCCATCACAAACGGCATGATGAACCTGAATCCGC
AGCGGCATCAGCACTTGTCCGCCTTGCGTATAATATTTGCCCATGGGTGA
AAACGGGGGCGAAAATGTCCTATTTGGCCACGTTTATCAAACTGGGTGAA
CTCACC
UFO03694.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prosbeta6-RA | 944 | CG4097-RA | 99..805 | 7..713 | 3535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16609539..16610155 | 713..97 | 3085 | 100 | Minus |
| 3L | 28110227 | 3L | 16610230..16610320 | 97..7 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:34:30 has no hits.
UFO03694.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:53 Download gff for
UFO03694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pros26-RA | 96..812 | 1..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:37:05 Download gff for
UFO03694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta6-RA | 93..809 | 1..719 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:45 Download gff for
UFO03694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prosbeta6-RA | 93..809 | 1..719 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:45 Download gff for
UFO03694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16609535..16610154 | 98..719 | 99 | <- | Minus |
| 3L | 16610230..16610324 | 1..97 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:37:05 Download gff for
UFO03694.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16603330..16603424 | 1..97 | 95 | | Minus |
| arm_3L | 16602635..16603254 | 98..719 | 99 | <- | Minus |
