UFO03695.5prime Sequence
1109 bp (1005 high quality bases) assembled on 2009-02-04
> UFO03695.5prime
CAGTCGACATGGCCCGCCTGATACGAATCCACTTGAAGCACGTTGAAACT
ACTGTGCTCTTGCTCAGGCGGAGGACGCAGCAGAGGACCAGGCGGCGGTT
TAGGATGCTGCGCACGTTTTTTATGCGCCAGATGATGGAGATGCACTCGA
ACTACCTGCACACTTACGCCATGCTGCGCCTGAAGCATTCCCAAGTCGTG
GACACGGAATCGGAAACCAGCGATGTCGATGAAGAACCACACGACAAGAT
TGGCGTGCCCTGCACCTTTCCCAGCTTCGATTCCCATTTCTTTGAGCATG
TGATTCCCGAGCTGAGCGAGGAGGACTTTCTCAACACACTCCATGTGACA
CGGGGAACCTTTGAGACCTTGTGCAAGCAACTTTCTCCCACTCTGCGGAC
GTCAGATGAACTGACTCAAAGAGAGCCAGCAATTTCTACCGAAAAGTGTG
TGGCTCTGGCTCTGAACTTCCTGGCCAGCGGCGAGCGGCTCTCTTTGATT
GCCGAGAGATTTTCTCTGCCCCGTCCAAGGACCATCAAGTGTTTAAAGGT
CTTTTGCAACGCCGTTATGTCCACTTTGGGGCGGGCGCTTCGCCAATTGC
CCCAGAATCCAGTGGACTGCAATAGTGTGGCCAAGGGGTTCCAGCGTGAA
AGCAACATGCCCGCCGCACTCGTCGGCGTCCTTGGCGTCTGCTCCATTCC
CATCCGATCCACTGGCGAGGCCAAGAACTCGATACTGCGCATGGAGTATC
TGCTCGACGATCGAATGCTCTTTCGGGAGCTGCAATTGGGGATGTGGCTT
GCGTGCCACCCTGGGACCCATGTTTTCCCACGCACCAAATACTCTTACCG
CAATCCCTGAATTCCGCATTAATTCCCGACTAGTTCCGGCCTTTGTCTTG
GCCCCGGTGTACCAGAATTATCCACTGCGTCCCTGGCTTTGCAGCGCTAT
ACTGATCCGACAGCTCCGCCACGAGCACGACTTCAACGGAGGTTGCCGCA
GCACCTGCAGGGATTGGAGTGACTGGCGCACTTGCATCCGCCTCCATGTC
CCGCTGGAGCTTCCTTAGCCCAACCTGGGAATTAGCTTTCCAATACGGCC
TCGGTGCAT
UFO03695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32095-RA | 1526 | CG32095-RA | 147..1237 | 9..1109 | 5075 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11824533..11825586 | 1070..9 | 4785 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:29:27 has no hits.
UFO03695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-30 09:19:49 Download gff for
UFO03695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32095-RA | 88..1160 | 9..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:42 Download gff for
UFO03695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32095-RA | 147..1219 | 9..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:03:39 Download gff for
UFO03695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32095-RA | 147..1219 | 9..1088 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:03:39 Download gff for
UFO03695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11824526..11825586 | 9..1076 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:42 Download gff for
UFO03695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11817626..11818686 | 9..1076 | 98 | | Minus |
