Clone UFO03704 Report

Search the DGRC for UFO03704

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:37
Well:4
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03704.5prime Sequence

1164 bp (1035 high quality bases) assembled on 2009-02-04

> UFO03704.5prime
CAGTCGACATGACCCACACATACAACGTATATTCTCACATTGCCATTTTC
ATTTCAATTCATTTCATTTATTTATGCAATATTTTATGTGCTCATTCATT
TTTTGCCCGTTCCGTTGTCGTCGGTGTGCCCGATTGTTCTATTAATTTGT
TGTCGCTCCTCGTTCGGGCTCCTCGTGGTCTCCGTACCATCCAGCCCATC
CAGTCCATCCAAGCCATCCTGGTCGGTGGCGTTTTGGCCCGGTTATTTGC
CATCCGCCTCGGTTCGGTTCCATTGTCAATTTGTTGGATACACGTCTATT
TGTACCTAGTATTGTATGCGCATAAAATTCGTGCCATAAACCCCATTCGT
CTTAATTTGTATGACTGTTTTGTTACGGTTACGGTTAGGCTCTGTGTTTT
GTGTTCTGTATTTTGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCTGGTGAAA
CGGGGGCGAAGATGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTG
AACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCT
TTAGGGAAATAGGCAGGTTTTCACCGTACACGCCACATCTTGCGAATATA
TGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCCCTCCAGAGCGATGAA
AACGTTTCAGTTTGCTCATGAAAACGTGTACAGGGTGAACACTATCCCAT
ATCACAGGTCACGTCTTTCAATGCATACAATTCCGAATGACCATTCATCA
GCGGCAAGAATTGGAATAAGGCCGAATAAACTGGCTAATTTTCTACGCCT
TAAAGGGCGTAATT

UFO03704.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 20:44:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21328585..21328993 416..8 2045 100 Minus
Blast to na_te.dros performed 2014-11-28 20:44:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dnet\R1A 1757 Dnet\R1A NEOR1A 1757bp 1063..1115 224..171 141 75.9 Minus

UFO03704.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:40 Download gff for UFO03704.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 21328585..21328996 1..416 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:27:40 Download gff for UFO03704.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 21328585..21328996 1..416 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:57 Download gff for UFO03704.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17154307..17154718 1..416 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:57 Download gff for UFO03704.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17154307..17154718 1..416 99   Minus