UFO03713.5prime Sequence
1052 bp (485 high quality bases) assembled on 2009-02-04
> UFO03713.5prime
CAGTCGACATGCGTGTAATCTTCCTCATCGTTGTGCTCGCCATGGTGGCT
CTGGCTGCTGTCCAAGGACGTCGTCCTCCAGGACTTCCGCAGGGAGGTCT
GGGACCACTTCAGGGCTCTGGAGGACTCCAGCCGCCGCAGGGAATACCTC
AGGGACCTCCCCAGGGACTCCCACAAGGACCTCCCCAAGGTGGCAACTCA
TCCTCCTCCGAAGACTCTTCCTCCCAGGAGAGCTCCAGCGAGTCCTCCAG
TGAGGCGTCCGCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCCAGATGGAGTTCTGAG
GTCATTACTGGATCTATCAACAGGAGTCCAAGCCGAGCTCGATATCCAAT
TACGGCCCGCCCTGGCCCCTCCTTCGCAAGACTGGTTGGAAATCCTTAAG
CATTTCTGGCGACAATGGGAAGCCATTCCAAACGGGCATGGAAGAACCCT
GAATCGGCCAGGCGGCAATCCGCCACCTTGGTCGCGCTTGCGGTATTAAA
TATTTGCCCATGGGTGGGAAACGGGGGGCGCAAAGGAGTTGTGTCACTAT
TGGGGCCACGTTTTAAATCTCAAAACTGGTGAAACTCACCCAGGGATTGG
CTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGG
TTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCG
GAAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCA
TGAAAACGTGTAACAGGTGACACTATCCCATATCACCAGCTCACGTCTTC
ATTGCATACGAATTCCGATGACATCATCAGCGGCAGATGTGATAAGGCCG
AAAACTTGTGCTTATTTTTCTTACGTCTTAAAGCGTAATTCAGCTGACGT
CT
UFO03713.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1678-RB | 434 | CG1678-RB | 56..310 | 9..263 | 1275 | 100 | Plus |
| CG1678-RA | 392 | CG1678-RA | 56..310 | 9..263 | 1275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21402463..21402717 | 263..9 | 1275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:10:38 has no hits.
UFO03713.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:57:08 Download gff for
UFO03713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1678-RA | 14..276 | 1..263 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:31 Download gff for
UFO03713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1678-RA | 14..276 | 1..263 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:35 Download gff for
UFO03713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1678-RA | 48..310 | 1..263 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:56:35 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:40:31 has no hits.
