UFO03725.5prime Sequence
865 bp (812 high quality bases) assembled on 2009-02-04
> UFO03725.5prime
CAGTCGACATGTCGCAGGCTCCCGTTCGCGTTTCCCCGCTGATCAAGTTC
GGCAGATGGTCCCTGCTCCTGGTGGGCATTGCCTACGGCGCCGCCCACCA
GAGCCGCCTGTCCAAGAAGGAGGAGAAGATGCGCGAGATCGAGGCACAGC
AGAAGGCCGTCCGTGATGCCAAGCTCGCCGAGGAGAAGAAGCGCAGCGCA
GAGGCTGAGGCCCGTGCCTTGGCTGAGCTTTCGAAGCCCACTCCCAAGCA
CGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGA
AGCCATCACAAACGGCATGATGAACCCTGAATCGCCAGCGGCATCAGCAC
CTTGTCGCCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAG
AAGTTGTCCATATTGGCCCACGTTTAAATCAAAACTGGTGAAACTCACCC
CAGGGATTGGCTGATACGAAAAACATATTTCTCAATAAACCCTTTAGGGA
AATAAGGTGTGGTTTTCACCGTAACACGCCACATCTTTGCGAATATATGT
TGTAGAAACTGCCGGTGATTCGTCGTGGTATTCACTCAGAAGCGATGAAA
ACGTTTTCGTTTGCT
UFO03725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3321-RC | 664 | CG3321-RC | 219..462 | 8..251 | 1205 | 99.6 | Plus |
| CG3321-RB | 599 | CG3321-RB | 154..397 | 8..251 | 1205 | 99.6 | Plus |
| CG3321-RA | 543 | CG3321-RA | 98..341 | 8..251 | 1205 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14327290..14327533 | 8..251 | 1205 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:51 has no hits.
UFO03725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:12 Download gff for
UFO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3321-RB | 198..441 | 8..251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:06:15 Download gff for
UFO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3321-RA | 98..341 | 8..251 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:14 Download gff for
UFO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3321-RA | 98..341 | 8..251 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:14 Download gff for
UFO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14327290..14327533 | 8..251 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:06:15 Download gff for
UFO03725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10153012..10153255 | 8..251 | 99 | == | Plus |
