UFO03734.5prime Sequence
1152 bp (1061 high quality bases) assembled on 2009-02-04
> UFO03734.5prime
CAGTCGACATGCGCTTCCTATTCGCTCTACTTCTCAGCGTGCTCCTGTGT
CTGCTCCTGGCTCAGGAGGGCAGTAGCAGCACATCTACATCCTCGACGGC
GACCACATCCACCGACTCCTCTGCCACCACTACCACGGCTTCATCCGCCA
CCACCACTACCACCACTGCCTCCTCCGCATCCACCACGACCACTGCCTCC
TCTTCCTCCTCCTCGGCGGAGGCCAGGAGGCGCAGACGTGCTCGCCGTCG
TCGCCTGGCTCGTGAGCGCCGTCGTCGCCAGGAGCGGAGACAGCGCCAGG
AAAAGAGGAGGCGCAGGATGGAGCAGCTGCTGGTGAGGCAGCGTCGCCTG
ATCAATCAGCTTCAGGGAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG
AAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACT
GGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAA
ACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGC
GAATATATGTGTAGAAACTGCCCGGAATCGTCGTGTATTCACTCAGAGCG
ATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAGGGTGACACT
ATCCCATATCACCAGCTCACCGTCTTTCATTGCATACGAAATTCGGATGG
AGCATCCATCAGCGCCAGAATGTGATAAAGGCGAATAAACCTGGCCTATC
CTACGGCTTAAGCGTATATCACTGACGCTGTATAGGTTACTTGAGCAACT
GA
UFO03734.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14454-RB | 445 | CG14454-RB | 17..376 | 9..368 | 1800 | 100 | Plus |
| CG14454-RA | 855 | CG14454-RA | 17..376 | 9..368 | 1800 | 100 | Plus |
| CG32453-RB | 741 | CG32453-RB | 18..377 | 9..368 | 1785 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22692153..22692512 | 368..9 | 1800 | 100 | Minus |
| 3L | 28110227 | 3L | 22697247..22697606 | 9..368 | 1785 | 99.7 | Plus |
| 3L | 28110227 | 3L | 22693532..22693735 | 266..63 | 665 | 90.3 | Minus |
| 3L | 28110227 | 3L | 22696024..22696227 | 63..266 | 665 | 90.3 | Plus |
Blast to na_te.dros performed 2014-11-28 22:53:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 230..289 | 934..992 | 144 | 73.3 | Plus |
UFO03734.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:56:57 Download gff for
UFO03734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14454-RA | 2..372 | 1..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:10 Download gff for
UFO03734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14454-RA | 10..380 | 1..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:47 Download gff for
UFO03734.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14454-RA | 10..380 | 1..373 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:28:47 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:11:10 has no hits.
