UFO03740.5prime Sequence
1137 bp (1016 high quality bases) assembled on 2009-02-04
> UFO03740.5prime
CAGTCGACATGACGGACGAAGTGCCCGCCAAAGGCAGCATATTGGGCAAA
CTCGTGCCCGCCCGCTATGTGCTGGCCCTCCTGGGGTCCATCGGCATGGC
CATTGTGTACGGCCTGAAGGTGAATCTCAGCGTGGCCATGGTGGCCATGG
TGAACCACACAGCCATTAAGGCCCACGGAGACGGCGGTGGACATGGGGGA
CACGGCAGCGTCATCCTTTCGAACGCCTCCCAAGTGTCCCTGGTGGAGGA
ATGCAACCCGCCGGGTGGTGCCTCCAATGTGACGGCTAAGGTGGAGGACG
GTCCCTTCGACTGGAGCGAGCCCCTGCAGGGAACCCTGCTGAGCTGCTAC
TTCTGGGGCTATTTGGTCTCGCAGATTCCGCTGGCACACGTCGCCGAGAA
CTTCTCCGCCAAGTGGGTGATGCTCTTCTCGGTGGCCATCAACGTCGTGT
GCACGCTGCTAACGCCCGTCTTTACTGAATTGCATTACGGTGGCCTGATT
CTGATGCGAGTGCTTGAGGGCGTCGGCGGAGGAGCCTCCTTCCCGGCCAT
GCACGTGATGATCGCCTCCTGGGCCCCTCCCACGGAGCGCATGGTCATGT
CCACCATCATCTACGTGGGCACATCTGCGGGTACGGCTCTTTCCATCCTC
CTGGCCGGCGTGTGCTCCGCCCAATGGGGCTGGGAGTCGGTCTTCTATGT
CATGGGCGCACTTAGCTGCATCTGGATGTTGCTGTGGGTCATTCTGGTCC
AGGACAACCCCAACAAGCAGCGTTTCATCAGTCTGGAGGAGCGCCAAATG
ATCACCAGCTCGCTGGGCACCGAACAGAGACGGAGCACCACCCGGCGGTT
CCATGGGGCAAGGTCTTCACCTCCGTGCCCTTCTGGGCCATTCTCATCGC
CCACACCTGCAGCACTTCGCTGGTATATGTTCCTCATCGAGATCCCTTCT
ACATGAGCAGTGCTCAAGTTCAACGTGTAGCATGCAGCCTCGTGCTCTGC
CCTACTCCCATGATCATCTCAGCATCTGTCTGGCAGCTCTCGACATCTGC
AGCAGTAGATCCACCACCGTTGCCCGCAGACGCCACTCATGACCTGATCT
GGATGCGCTGCTTGCTATCGATGCGTACATTGAGGCG
UFO03740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MFS3-RA | 2029 | CG4726-RA | 171..1266 | 9..1078 | 4875 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1145444..1146378 | 49..977 | 4375 | 99.4 | Plus |
| 2L | 23513712 | 2L | 1143371..1143410 | 9..48 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:45:40 has no hits.
UFO03740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:06 Download gff for
UFO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4726-RA | 169..1230 | 9..1052 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:35 Download gff for
UFO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MFS3-RA | 171..1232 | 9..1052 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:12 Download gff for
UFO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MFS3-RA | 171..1232 | 9..1052 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:12 Download gff for
UFO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1143371..1143410 | 9..48 | 100 | -> | Plus |
| 2L | 1145444..1146459 | 49..1046 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:35 Download gff for
UFO03740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1143371..1143410 | 9..48 | 100 | -> | Plus |
| arm_2L | 1145444..1146459 | 49..1046 | 98 | <- | Plus |
