UFO03747.5prime Sequence
1109 bp (1000 high quality bases) assembled on 2009-02-04
> UFO03747.5prime
CAGTCGACATGAGACAGTTGTTAGTTTTATTGGTGCTTGTCGGGATTGGC
CATTCCGCTGCCAAGTTGAATCGCGTCCAGCTCCAAGTGAACAAGAATTT
CACCAAGACCCATGGCAGTGTTAAGGCCGAGAAGACCGTGCTGGCATCGA
AGTACTCCTTTTTGGCGGAGACCTCTTTCAGTGTCAGTTCGTCGGGTGCC
ACCGAAAACCTGCACAATTCCATGAACAATGAGTACTACGGCGTGATTGC
TATCGGAACGCCTGAGCAGAGATTCAACATTCTGTTCGACACGGGATCGG
CCAATCTGTGGGTTCCAAGTGCAAGTTGCCCGGCTTCGAATACCGCGTGC
CAGAGGCACAACAAATACGATTCTTCGGCATCCAGCACTTATGTGGCCAA
TGGTGAGGAGTTCGCCATCGAATACGGAACTGGTAGTCTGTCGGGTTTCC
TGTCCAACGACATTGTGACCATAGCGGGAATCAGCATTCAGAATCAGACA
TTCGGCGAAGCACTCAGCGAGCCGGGTACAACCTTCGTGGATGCTCCTTT
TGCTGGAATCCTGGGACTGGCCTTCAGCGCGATTGCCGTCGATGGAGTGA
CTCCGCCGTTCGACAACATGATCTCCCAGGGACTGCTCGATGAACCAGTT
ATCTCCTTCTATCTCAAGCGACAGGGAACCGCTGTGCGCGGTGGAGAACT
GATCCTGGGCGGTATTGACTCGAGTCTCTATAGGGGAAGCCTCACCTATG
TGCCCGTTTCCGTTCCTGCCTACTGGGCAGTTCAAGGTGAACACCATCAA
GACCAATGGCACTTTGCTGTGCAACGGATGCCAAGCCATCGCCGATACGG
GCACCTCCTTAATCGCAGTTCCACTGGGCCGCTTACAGGAGATCAATCGC
CAGCTGGGCGCCACCGATAATGACGTGAGCATTCGTGGAGGTGCGGCCGA
GTCTCATCCCTGCCCAAGGTCACCTGGATATCGGTGTTACTGTCTTTCAC
CCTGGCACAAGGATTAATATAGTCAAGTACGCGAATGACCACCTACTGCC
TGTCGCTCACCTACATGGAAGGGAATTACCTCTGGAATCGTGTGATGTCT
TATGCAGGT
UFO03747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17134-RA | 1263 | CG17134-RA | 26..1131 | 6..1101 | 4895 | 97.2 | Plus |
| CG6508-RA | 1379 | CG6508-RA | 818..874 | 820..876 | 180 | 87.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10820730..10821752 | 6..1027 | 4610 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:10:21 has no hits.
UFO03747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:08 Download gff for
UFO03747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17134-RA | 16..1110 | 1..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:21 Download gff for
UFO03747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17134-RA | 21..1115 | 1..1086 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:01 Download gff for
UFO03747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17134-RA | 21..1115 | 1..1086 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:01 Download gff for
UFO03747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10820725..10821819 | 1..1086 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:21 Download gff for
UFO03747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10820725..10821819 | 1..1086 | 97 | | Plus |
