UFO03751.5prime Sequence
1122 bp (1019 high quality bases) assembled on 2009-02-04
> UFO03751.5prime
CAGTCGACATGCGTTCCCTGATTCTTGTCGCTCTTTTGGCCTTCTTGGCT
GTTGGCTTTGTGGCTGCCCGTCCAGCTGAGGATGAGGAGTCCTCCGCTGC
CGTGGTTGAGAATGCCGATGAGGATTCGACTAGCAATGATGCGGAGAGCA
CCGAAGCCACTGATGCGGAGGAATCTTCTGATGATGAGGAGACGACTGAA
GAGTCTGGTGATGCCGCTGACGAATCCAGCGATGATGCCGATGAGGATGA
GACAACCACTGCAGCTTCGGCCAAGAAGCAGATCCGTCCCTTCTGGCCCA
GGTTCGGAGGTCATGGTCCAGTTGTGATCAGGCGTCACCCTAGTCTTGTC
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAG
TTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGG
ATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGG
CCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAACT
GCCTGAATCGTCGTGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTG
CTCATGGAAAACGTGTAACAAGGGTGAACACTTTCCCATATCACAGCTCA
CCGTCTTTCATTGCATACGAATTCGATGAGCATCATCAGCGGCAGATGGT
GATAAAGCGATATAACTTGTGCTTATTTTTCTTTACGTCTTTGAAGCGTA
TATTCAAGCTGACGGTCTGTTA
UFO03751.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12310-RA | 544 | CG12310-RA | 42..383 | 9..350 | 1710 | 100 | Plus |
| CG13461-RA | 560 | CG13461-RA | 16..102 | 9..95 | 255 | 86.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15050424..15050765 | 350..9 | 1710 | 100 | Minus |
| 3L | 28110227 | 3L | 15052389..15052475 | 95..9 | 255 | 86.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:10:14 has no hits.
UFO03751.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:01:01 Download gff for
UFO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12310-RA | 34..382 | 1..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:19 Download gff for
UFO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12310-RA | 35..383 | 1..350 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:58 Download gff for
UFO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12310-RA | 35..383 | 1..350 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:58 Download gff for
UFO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15050424..15050772 | 1..350 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:19 Download gff for
UFO03751.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15043524..15043872 | 1..350 | 98 | | Minus |
