UFO03767.5prime Sequence
1122 bp (1041 high quality bases) assembled on 2009-02-04
> UFO03767.5prime
CAGTCGACATGAAGCTGCTCCGTCTAAGCCTTTTAATTCTCCTAGCGGTG
AAGCCCCCAAATCCCTGTGAATCAAAGCGCATAGTTGGCCCCTTTCCTGC
GGGTCAATCTGGCAGGATAAAGGGTGGCGAGGAGGCTGAGATCGGATTTG
CTCCATACCAGGTGTCCCTGCAACCCATAGTGGGCTCCCATAATTGCGGT
GGTGCCATCCTAAACGAAAACTGGATCATAACTGCTGGACACTGCGTGGA
AAATTTCATTCCCGCCCTGGTCAATGTGATCACGGGCACCAATAAGTGGG
CAGAGCCCGGAGCGATCTACTACACCGCCGAGATCCACAAACACTGTATG
TACGACCAGCCTTACATGCATAACGACATCGCCCTGGTGAAGCTTACCGA
GAACATCACCTTCAATGAGCTGACACAGCCGATCGCTTTGCCAACTAGAC
CGGTTCAACTCGGCGAAGAGATCGTCCTCACGGGCTGGGGCTCCGATGTG
GCCTACGGGAGTTCCATGGAGGACCTGCACAAGCTGACCGTGGGCCTTGT
TCCTCTGGATGAGTGCTATGAGACCTTCAACCGAACCAGCAGCATGGGTG
TGGGTCACATCTGCACCTTTTCGCGCGAGGGTGAGGGCGCCTGTCACGGC
GATTCCGGTGGTCCGCTGGTGAGCAATGGCCAATTGGTGGGTGTGGTCAA
TTGGGGACGACCATGCGGTGTCGGACTGCCCGATGTGCAGGCCAATGTGT
ACTACTACCTCGACTGGATTCGCAGCAAGCTCAGTGGCAACAACAAATGC
TACTACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTTCACAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAATTCAGATGGAGTTCTGAGGTCATTACT
GGATTTTTCACAGGAGTCCAGGCGAGCTCGATATTCAAATTACGCCCCGC
CCTGCCCACTCATCGCAGTATTGGTTGGTTATTTCTTTAAGCATTCTGGG
CGACTTGGAAAGCCATACTACC
UFO03767.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31265-RA | 909 | CG31265-RA | 30..832 | 4..806 | 4000 | 99.9 | Plus |
| CG31269-RB | 937 | CG31269-RB | 599..717 | 599..717 | 235 | 79.8 | Plus |
| CG4053-RB | 925 | CG4053-RB | 634..755 | 603..724 | 205 | 78.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17128241..17129043 | 4..806 | 4000 | 99.9 | Plus |
| 3R | 32079331 | 3R | 17127724..17127842 | 599..717 | 235 | 79.8 | Plus |
| 3R | 32079331 | 3R | 17131444..17131565 | 724..603 | 205 | 77.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:04:14 has no hits.
UFO03767.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:54 Download gff for
UFO03767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31265-RA | 15..826 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:14 Download gff for
UFO03767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31265-RA | 27..838 | 1..815 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:41 Download gff for
UFO03767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31265-RA | 27..838 | 1..815 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:41 Download gff for
UFO03767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17128238..17129049 | 1..815 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:14 Download gff for
UFO03767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12953960..12954771 | 1..815 | 99 | == | Plus |
