UFO03772.5prime Sequence
1083 bp (986 high quality bases) assembled on 2009-02-04
> UFO03772.5prime
CAGTCGACATGAAGATCACCGTGGTACTCGTACTTCTCGCCACCTTCCTC
GGCTGTGTGATGATCCACGAGTCGGAGGCGTCCACAACCACCACGTCCAC
CTCCGCCTCGGCCACTACCACTACTTCCGCTTCGGCGACCACCACTACTT
CCGCTTCGGCCACCACCACCACTTCCGCTTCGGCCACCACAACAACAGCC
TCACCTTCCTCGAGCTCAAAAAAGAAGACTGTCACTCACTATAAGCGAAA
GGTCAAGAGGCCAAAGAAGGTCAGGAAAATCACAAGGAGAAGGGGTCTCA
GGAGCCGCAATGGTCGCAGCAGTAGAAACCGCAGATCGGAAGAAGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCA
TAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCAT
GACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGC
GTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAA
CAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCA
TCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATC
ACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGC
CTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCC
ATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGC
TGAGACGAAAAACATATTCTCAATAACCCTTTTAGGGAAATAGGCCAGGT
TTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCCG
GAAATCGTCGTGGTATTCACTCCAGAGCGATGAAACGTTTTCAGTTTGCT
CATGGAAAACGTGTACAAGGTGACACTTATCCATATCACCAGCTCAACGG
TCTTTCATTGCATACCAATTCGGATCGAGCATTTGTCAGCGGCAGGATGT
AAGTAAGACGGATAAACTGGCTATTTTTCTTAC
UFO03772.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ng2-RA | 546 | CG14266-RA | 37..373 | 8..344 | 1685 | 100 | Plus |
| ng1-RA | 523 | CG10781-RA | 38..349 | 8..319 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3240199..3240535 | 344..8 | 1685 | 100 | Minus |
| X | 23542271 | X | 3242449..3242760 | 8..319 | 1560 | 100 | Plus |
| X | 23542271 | X | 3240353..3240417 | 166..102 | 250 | 92.3 | Minus |
| X | 23542271 | X | 3240377..3240441 | 190..126 | 250 | 92.3 | Minus |
| X | 23542271 | X | 3242543..3242607 | 126..190 | 250 | 92.3 | Plus |
| X | 23542271 | X | 3242567..3242631 | 102..166 | 250 | 92.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:21:22 has no hits.
UFO03772.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:55 Download gff for
UFO03772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ng2-RA | 32..377 | 1..349 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:45 Download gff for
UFO03772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ng2-RA | 32..377 | 1..349 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:58:33 Download gff for
UFO03772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ng2-RA | 32..377 | 1..349 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:58:33 Download gff for
UFO03772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3240199..3240538 | 1..344 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:45 Download gff for
UFO03772.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3134232..3134571 | 1..344 | 98 | | Minus |
