UFO03779.5prime Sequence
1149 bp (1055 high quality bases) assembled on 2009-02-04
> UFO03779.5prime
CAGTCGACATGCACTCGTCACTCAGCTGGACCTCGCGTGCGATCTCTCGC
GCCCTGCGCAGCAGCTTCTCCACGCTCCTGGAAACGGCCACGGGTGGCGG
AAGTGGGGCAGCAGCCAAGGGGGCCACCAAGTCGGGAGCGACACCAGGAT
CCTCGGGCGCCCCACGACCCCGTTTCGTGTCGGTGGTGTGCGGCTTCGCC
AAGGACAACCTGCGACACAAGTACAAGCCGGGAAAGTACGGCGAGGACTC
ATGGTTCAAGGCCTCCACCGCCAGTGCCGATGTCATGGGCGTGGCCGACG
GCGTGGGCGGCTGGCGAAGCTATGGCATCGATCCCGGAGAGTTTTCATCG
TTCCTGATGCGCACCTGTGAGCGGTTGGTGCAGTGCAGCCACTTTAATCC
CCAACGACCAGTCAACCTGCTGGCCTACAGCTACTGCGAGCTGATGGAGC
AGAAGAAGCCCATACTGGGCAGCAGCACCGCCTGCGTCCTGATCCTCAAC
CGTGAGACGAGCACCGTGCACACGGCCAACATCGGCGACAGCGGCTTCGT
TGTGGTGCGCGAAGGCCAGGTGGTTCACAAGTCCGAGGAGCAGCAGCACT
ATTTTAACACACCCTTCCAACTGTCATTGCCGCCGCCGGGACATGGGCCC
AATGTCCTCAGCGACAGCCCTGAGTCGGCGGACACGATGAGCTTTCCGGT
GCGGGATGGCGACGTGATTCTCATTGCAACCGACGGAGTGTTCGACAACG
TGCCCGAGGATCTAATGCTGCACGTGCTTAGCGAGGTGGAGGGCGAACGC
GATCCCGTCAAGCTCCAGATGACGGCCAACAGCCTGGCGCTGATGGCGCG
CACCCTGTCCCTCAACAGCGAGTTCCTCTCGCCCTTCGCCCTCAGCGCCA
GGAGGAATACATTCAGCGCGTGCGGCAAGCCGGACGACATCACCGTTGTC
TGCCACCGTGCGATGGCAGCTTTCTAGACATTCGTTTGGCGCGGCGGCCC
AGGTAGTGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAAGAAATTCTGGTCATGACTGTGCTGATCCTCACGATAAAAACGCCCGG
CGCCACCGACGTCTGACAATCCGATGGAGTCTGAGGTCTTTACTGATTA
UFO03779.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12091-RB | 1907 | CG12091-RB | 275..1237 | 9..965 | 4650 | 99.3 | Plus |
| CG12091-RA | 1824 | CG12091-RA | 275..1237 | 9..965 | 4650 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1535617..1536561 | 950..9 | 4560 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:13:54 has no hits.
UFO03779.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:48 Download gff for
UFO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12091-RA | 269..1237 | 5..969 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:15 Download gff for
UFO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12091-RA | 273..1241 | 5..969 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:12 Download gff for
UFO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12091-RA | 273..1241 | 5..969 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:12 Download gff for
UFO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1535617..1536563 | 5..950 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:15 Download gff for
UFO03779.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1535617..1536563 | 5..950 | 99 | | Minus |
