Clone UFO03783 Report

Search the DGRC for UFO03783

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:37
Well:83
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG9757-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO03783.5prime Sequence

1138 bp (999 high quality bases) assembled on 2009-02-04

> UFO03783.5prime
CAGTCGACATGCGCACATTTGTTTGCCTTGCCCTGGCGACCATTCTCCTG
GTCGCCGGCTCATCAGCAGCCACATATGATCCTGTGGCGGCGCAACTTCT
GGATGTGGATGCAGGTGTCCAGGCTCCGGTGGCAGCACGCCAAGCACGTC
AGTTTGGCGGCGGCTTTGGCGGTCCGGGAGGCGGTTTCGGAGGTCCAGGC
GGCGGATTCGGAGGTCAAGGCGGCGGATTCGGAGGTCCAGGCGGTGGATT
CGGAGGTCAAGGCGGCGGATTCGGAGGTCAAGGCGGCTTCGGAGGCGGTG
GCTTTGGTGGACGTCCAGGTGGCGGCTTTGGCGGTCCGGGAGGCGGCTTC
GGAGGACCAGGCGGTGGCTTCGGTGGCGGATTTGGAGGCGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGA
CGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCA
CCGTACACGCCACATCTTGCGAATATATGTGTAGAAACTGCGGAATCGTC
GTGTATTCACTCCAGAGCGATGATACGTTTCAGTTTGCTCATGGAAAACG
GTGTACAGGTGAACACTATCCATATCACCCAGCCTCACCGTCTTTCATGC
ATACGAATCGGATGAACATCATCAGGCGGCAGAAATGTAAATAGGCGAAT
AAAACCTTGGCCTTATTTTCTTTACGACCTTTAAAGGG

UFO03783.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG9757-RB 851 CG9757-RB 57..437 9..389 1905 100 Plus
CG9757-RA 568 CG9757-RA 57..437 9..389 1905 100 Plus
CG9757-RB 851 CG9757-RB 204..292 198..286 310 89.9 Plus
CG9757-RB 851 CG9757-RB 246..334 156..244 310 89.9 Plus
CG9757-RA 568 CG9757-RA 204..292 198..286 310 89.9 Plus
CG9757-RA 568 CG9757-RA 246..334 156..244 310 89.9 Plus
CG9757-RB 851 CG9757-RB 204..272 219..287 225 88.4 Plus
CG9757-RB 851 CG9757-RB 267..335 156..224 225 88.4 Plus
CG9757-RA 568 CG9757-RA 204..272 219..287 225 88.4 Plus
CG9757-RA 568 CG9757-RA 267..335 156..224 225 88.4 Plus
CG9757-RB 851 CG9757-RB 207..259 321..373 205 92.5 Plus
CG9757-RB 851 CG9757-RB 369..421 159..211 205 92.5 Plus
CG9757-RA 568 CG9757-RA 207..259 321..373 205 92.5 Plus
CG9757-RA 568 CG9757-RA 369..421 159..211 205 92.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:07:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13611997..13612377 389..9 1905 100 Minus
3R 32079331 3R 13612100..13612188 244..156 310 89.9 Minus
3R 32079331 3R 13612142..13612230 286..198 310 89.9 Minus
3R 32079331 3R 13612099..13612167 224..156 225 88.4 Minus
3R 32079331 3R 13612162..13612230 287..219 225 88.4 Minus
3R 32079331 3R 13612013..13612065 211..159 205 92.5 Minus
3R 32079331 3R 13612175..13612227 373..321 205 92.5 Minus
Blast to na_te.dros performed on 2014-11-28 21:07:53 has no hits.

UFO03783.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:52 Download gff for UFO03783.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9757-RA 45..433 1..389 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:45 Download gff for UFO03783.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9757-RA 49..437 1..389 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:42:30 Download gff for UFO03783.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9757-RA 49..437 1..389 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:42:30 Download gff for UFO03783.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13611997..13612384 1..389 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:45 Download gff for UFO03783.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9437719..9438106 1..389 98   Minus