UFO03791.5prime Sequence
1105 bp (941 high quality bases) assembled on 2009-02-04
> UFO03791.5prime
CAGTCGACATGAGCAATATTTACATCCAAGAACCACCCACGTCGGGAAAG
GTGCTCCTTAAGACCACTGTGGGCGACATAGACATCGAGTTGTGGGCACG
GGAGTGTCCGAAGGCGTGCCGCAACTTTGTGCAACTCTGCCTAGAGGGCT
ACTACAAGAACACCGAATTCCACCGGCTGGTCAAGGGCTTTATTGTCCAG
GGAGGCGATCCGAATGGCGACGGCACCGGCGGCGAGTCCATATACGGACA
GCCCTTCAAGGATGAGTTCCACTCCCGACTCCGGTACACGCGTCGTGGCC
TCGTCGGCATGGCAAATTCTGGAAAGGATGACAATGGCTCACAGTTCTTC
TTCACATTTGCTCCGACACCGGAGCTGCAGAATAAGAACACGCTTTTTGG
AAAGATCACCGGCGATACCATCTACAACATGCTCAAGCTGGAAGATGGCA
TTGTTGACCACCAGGAAAGACCGATGCACGCACATCGCATCGTTTCTACG
GAAGTCCTCTCGAACCCATTCGATGATATCGTTCCTCGTATTCTCTCCCA
ACCTTCCACGAAGAGCAAAAAGACTAAGAAGGAGCGACAAGGAGTCAAAA
ACTTCGGACTGCTTTCTTTTGGCGAAGAAGCCGAAGGTGACGAGGAGGAG
ACCAACGTCTATGTTAAACAGAACGCCGGTAAGGCGAAATCCCTGCACGA
CGTCACAGATGATCCAAAACTCAGCAAGGAGCCCATTCGTGTACCCAAAG
TAGAAAAAGCCGACATCGAGGAGCACTTGTCCGACGATTGCCCTGAGGAC
AGTGTCAAGGATAAACCGTCCACTGCTAGTTCGGATCTCATCAAAATGAA
CTGTCTAAGAGATCAAAGAGTGAGCAGACAAAAGTCAGCATGAGAAGTTG
TTAGTGCAGTGTTGTACCGAGAGACATCAAAGTCCGAGAATCAGTCGAGA
TCCTCTGAAGATCATGAACACAACATATAGAAGAGCATCAGATAGTCGAC
TATACATAAGTAGATCCCATAGTCCAGACAAGTATGCATCATCAATGATG
AATCCGAGACGCAGAACGTAAGATCGATGGCATATAAACGTAAGCAGATG
ACAAC
UFO03791.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10907-RA | 1610 | CG10907-RA | 74..950 | 9..883 | 4335 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11793587..11794176 | 9..598 | 2950 | 100 | Plus |
| 3L | 28110227 | 3L | 11794354..11794640 | 599..883 | 1335 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:19:34 has no hits.
UFO03791.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:42 Download gff for
UFO03791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10907-RA | 44..929 | 9..889 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:02 Download gff for
UFO03791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10907-RA | 74..959 | 9..889 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:59 Download gff for
UFO03791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10907-RA | 74..959 | 9..889 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:59 Download gff for
UFO03791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11794354..11794649 | 599..889 | 98 | == | Plus |
| 3L | 11793587..11794176 | 9..598 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:02 Download gff for
UFO03791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11786687..11787276 | 9..598 | 100 | -> | Plus |
| arm_3L | 11787454..11787749 | 599..889 | 98 | == | Plus |
