UFO03795.5prime Sequence
1118 bp (1002 high quality bases) assembled on 2009-02-04
> UFO03795.5prime
CAGTCGACATGTACAAATTCGTGTTGATCGCCAGCCTGCTGGTCGCCCTC
TGCATGGCAGCTCCTCCCCGCCAGGAATCCGAAGCCGAAAGGATAGAGAG
GGAGGAGTACGAGAAATATCAGAATGAAAACGCCCAGTACTCGTTCAATT
CGAGTGTGGATGATAAGATCAACGATGGACAAATCTCACGTAATGAGGAG
CGCGAAGGAGGCACTGTTCGTGGTTCCTACAGCTACTTCGATGGTTTCGT
GAAGCGCCGTGTTGAGTACATCGCCGATAAGGACGGCTACAGGGTGCTCA
AGGACGAGATCGAGGATGTCGGCAATGGTCCTTCGTTCAATCCCGATGGC
ATAGCCAACGTGGAGGGCTCTATGATCGGCAAATACTCCATCAAACTGGA
TAAGGCCGACGATGACAAGCACTACAAGGACATTCATGCCGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
AGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTG
CGTATAATATTTGCCCATGGTGAAAACGGGGGGCGAAGAAGTTGTCCATA
TTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGA
GACGAAAAACATATTCTCATAAACCCTTTAGGGAAATAGGCCAGGTTTTT
CATCGTACACGCCACATCTTGCCGAATATATGTGTAGAACCTGCGAAATC
GTCGTGTATCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGAAACG
TGTACAGGTGAACCTATCATATCACAGCTCACGTCCTTCATGCACGAATC
GATGACTCACGAGCGCAG
UFO03795.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr51A-RA | 651 | CG10112-RA | 84..515 | 9..440 | 2160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14512695..14513066 | 440..69 | 1860 | 100 | Minus |
| 2R | 25286936 | 2R | 14515069..14515128 | 68..9 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:45:29 has no hits.
UFO03795.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 12:00:45 Download gff for
UFO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr51A-RA | 73..512 | 1..440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:46 Download gff for
UFO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr51A-RA | 76..515 | 1..440 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:56 Download gff for
UFO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr51A-RA | 76..515 | 1..440 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:56 Download gff for
UFO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14515069..14515136 | 1..68 | 94 | | Minus |
| 2R | 14512695..14513066 | 69..440 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:46 Download gff for
UFO03795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10402574..10402641 | 1..68 | 94 | | Minus |
| arm_2R | 10400200..10400571 | 69..440 | 100 | <- | Minus |
