UFO03803.5prime Sequence
1132 bp (994 high quality bases) assembled on 2009-02-13
> UFO03803.5prime
CAGTCGACATGCTGCGTCGCATTGTCCAAGTGGGTGCCCGGGAGTTGAGC
CGAGCCCAATCGTCAACCGCCAGCGCGGAAAAGTGGGACCTGTACGCCGG
AGTGCTCGTAGAGCGTCTCCCTGTGGTGTCCAAGTCCCTTAATCCGCTGG
AAAAACAGTTCCAAGACTTGCTATGGCGCGTGGAGTACGAAAACAGCCTG
AAGTCTGACCATGAACTCAAGCATGAACGTGAGATCGTCCAGGCGGAGCT
CATAAAGCAGGGCAAGATCCAGGTGGACTTGGAGGACGCAGGATCCAAGC
AGACAGCTCAGGACCTCAAGGACGCCTACGTCGAGGAGCTAAAAAAGTTC
CAGTTGGGCTCCCGCACCACGCCCGATGACCAGGCCAACAGAACCACCTC
CACGGACCGCTGTCTGGATGACACGCTCTACCTTTTGGTACAGCAGAAGC
TGGGCCAGCAGGAGCACCTCATTCTACCGCAGGGAAAGCGTGAGGAGGGA
GAGTCCATGCGTCAGACTGCAGAAAGAGTGCTCCGCGAGAGTTGCGGCCA
GGAGCTGCAGGTTCTTTTCTACGGCAACGCCCCAGTGGGCTTCCACAAAT
ACAAGTATCCCAGAAACCAGCGGACGGAGACTGTCGGAGCCAAGGTCTTC
TTCTACAGAGCATCCCTGCGGTCCGGCCAGGTGCCCGAAAATCTGACCAA
GTTCGAGTGGCTTCCCAAGGAGGCGCTCAATGAAAAGCTGACCAATACAG
CCTATGCCCCAAAGCGTTAAAAGTTCTTGTTGGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATATTCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
GATTCTCACCAATAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAATT
CAGATGGAGTTCTGGAGTCTTTACTTGATCTTACAACCAGGAGTCTAGCG
AGCTCGATATCAATACGCCCCCGCCCTGCCAACTCACTCCAGTACTGTTG
TAATTCATTAGCATCCTGGCGAACTGAATCCTCTACAACCGGCTAAGTTA
GAACTCGAATCGGCACCGCCATAGAGCTTTGT
UFO03803.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:25:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL46-RA | 909 | CG13922-RA | 78..851 | 9..782 | 3825 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:25:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1777516..1778289 | 9..782 | 3780 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:25:03 has no hits.
UFO03803.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:56:13 Download gff for
UFO03803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 76..852 | 9..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:37 Download gff for
UFO03803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 78..854 | 9..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:58 Download gff for
UFO03803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL46-RA | 78..854 | 9..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:58 Download gff for
UFO03803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1777516..1778292 | 9..786 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:37 Download gff for
UFO03803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1777516..1778292 | 9..786 | 99 | == | Plus |
