UFO03809.5prime Sequence
1054 bp (1011 high quality bases) assembled on 2009-02-13
> UFO03809.5prime
CAGTCGACATGAAAGCCTCGCTAGCTCTAGTGTTCTGTGTTTGTGTCGGT
CTTGCGGCAGCTGCTCCTGAAAAAACCTACACCAACAAGTACGACAGTGT
CAACGTGGATGAAGTTCTGGGCAACAACCGAGTGTTGGGTAATTATCTCA
AGTGCCTGATGGACAAGGGCCCATGCACAGCAGAGGGTCGTGAACTTAAG
CGCCTTTTACCCGACGCCCTTCATTCCGACTGCTCAAAGTGCACGGAAGT
CCAACGCAAAAACTCACAAAAGGTAATCAACTACCTTCGCGCCAACAAAG
CCGGCGAATGGAAGCTCCTCCTGAACAAGTACGATCCCCAAGGCATCTAC
AGAGCAAAGCACGAGGGACACGCAAGCTTTCTAGACCATTCGTTTGGCGC
GCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATC
ACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCA
ATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAG
TTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATA
TCAAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCAT
TAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGA
ATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCAT
GGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAA
AACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCA
ATAACCCTTTAGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATTCT
TGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGGTATTCACTCAGA
GCGATGAAACGTTTCAGGTTGCTCATGAAAACGGTGTAACCAGGGGGAAC
ACTTATTCCATATATCAACCAGCTTCACCGTTCTTTCATGTCCACACGAA
AATT
UFO03809.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:18:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Phk-3-RC | 718 | CG9358-RC | 257..619 | 9..371 | 1815 | 100 | Plus |
| Phk-3-RB | 635 | CG9358-RB | 174..536 | 9..371 | 1815 | 100 | Plus |
| Phk-3-RA | 546 | CG9358-RA | 85..447 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24970942..24971304 | 371..9 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:18:43 has no hits.
UFO03809.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:56:11 Download gff for
UFO03809.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Phk-3-RA | 82..454 | 9..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:31 Download gff for
UFO03809.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Phk-3-RA | 85..457 | 9..380 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:35 Download gff for
UFO03809.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Phk-3-RA | 85..457 | 9..380 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:12:35 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:24:31 has no hits.
