UFO03811.5prime Sequence
612 bp (100 high quality bases) assembled on 2009-02-13
> UFO03811.5prime
CAATCCACATGAAATCCACCATATCTTTGCTACTGGGCGTTATCTGCACC
GTGGTCCTGGACGCGCAACAGAACCAAGCGAAAAAGGGATGCCCGGCCTA
CTGTCATGTGTGCTACGGTGGTCATGGGAAGCGCTCTCTGAGCCCCGGAT
CCGGGTCTGGAACGGGAGTGGGCGGGGGAATGGGCGAGGTTTTTTCCGGG
GGGTACGAACCGGACTATGTGCGTCCGAATGGCATACTGCCCATGATGGC
CTTTATGATAGGTGCCGCTCGAGGGCCACTTTAATGACTATCCCGCCCGT
TTGGGGCTTTACCTAATCTTGAAGTCGTGGTTTAATTGAACTCGCCGACC
CGCCTCTCGCCTGGGTGAACTTGATTATCCCTTGTTCAATTCGGCCGAAG
TGAATGGCTTGAGCTTCAGCTTTCTAGACCATTCTTTTGGCCCGCGGGCC
CAGGTGAGTGGTGGTAATCATAATCATATTCATAATCATAATCACAACTA
GCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCGTAGACTC
CCCCCGGCGGCTCCTAGCGTTCTGAAAAATCCAGATGGACCCCTGAGGTC
TTTACTGGATCT
UFO03811.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CCHa2-RC | 1322 | CG14375-RC | 297..703 | 8..412 | 1460 | 90.9 | Plus |
| CCHa2-RB | 1281 | CG14375-RB | 256..662 | 8..412 | 1460 | 90.9 | Plus |
| CCHa2-RA | 1167 | CG14375-RA | 142..548 | 8..412 | 1460 | 90.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13390048..13390295 | 330..85 | 780 | 89.5 | Minus |
| 3R | 32079331 | 3R | 13391865..13391941 | 84..8 | 340 | 96.1 | Minus |
| 3R | 32079331 | 3R | 13389678..13389760 | 412..330 | 295 | 90.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:05:23 has no hits.
UFO03811.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-02-03 11:56:17 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 23:53:56 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:41:11 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:11 Download gff for
UFO03811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13391865..13391943 | 3..84 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:56 Download gff for
UFO03811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9217587..9217665 | 3..84 | 92 | | Minus |
