UFO03820.5prime Sequence
1146 bp (1026 high quality bases) assembled on 2009-02-13
> UFO03820.5prime
CAGTCGACATGAACGTCAGCGCCGATTTTAAGCCGGTGCCCACGCGTGCA
GCGTTGGCGCTGCAAAAGAAGCAGGAGAACACCGAATTTCAGGCACACGT
CTTCCACGAATCGCACTTCCAATCGAAAAGTGGAACAAAAAAGCAGGACG
ACGGCGTCCAAAAATCGCACAAAACCAAGGAGGGCGGCATGGAACTGAAT
CCCGAATTCGATATCAAGAAGGCGCGCCACGAGGTGCTCAATTTTGCGAT
CAAAAACCAGCGTGTGATCAAAAACAAGAGCAAAATGGAAATGTTTCAGC
TGATCAAGCTGGGCGCCAAGCCGCTGAAGAAGGCCTCCAAAAACTACAAG
GAGCTGAAGGACGAACGCCAGCGGCTGAAGAATATTCGCGAGGAGCGCAA
GAAGTTCCATCAGTTGGGCAAAAATCAAACGGGCGCCGCCAGCGTCAAAT
GCCGAACAAAATCGCAAAAGGAGCGCAACGACAAGAGGCGCGCGCCCGTT
TCACACATCGATCAGCACTACGGCAAGGCGCAGCCCAAGTTTAAGACGAG
AAAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCATCAGCA
CCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAAACGGGGGCGAAGA
AGTTGTCATATTGGCCACGTTTAATCAAAACTGGTGAACCCACCCAGGAT
TGCCTGAAGACGAAAAACATTTTCTCATAATCCCTTTAGGAAATAGCAGG
TTTTCACCGGTAACCGCCCAATCTTGGGAATAATATGTGTAGAAAACTGC
CGAAATCGTCTTGAAATTCACTCTCTCAAGAGCGCGATGAAACGTT
UFO03820.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:27:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1738-RA | 799 | CG1738-RA | 124..669 | 9..554 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:27:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11349172..11349717 | 9..554 | 2730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:27:06 has no hits.
UFO03820.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:52 Download gff for
UFO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1738-RA | 115..669 | 1..562 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:40 Download gff for
UFO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1738-RA | 120..674 | 1..562 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:52 Download gff for
UFO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1738-RA | 120..674 | 1..562 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:52 Download gff for
UFO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11349168..11349717 | 1..554 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:40 Download gff for
UFO03820.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11243201..11243750 | 1..554 | 99 | == | Plus |
