UFO03822.5prime Sequence
736 bp (735 high quality bases) assembled on 2009-02-13
> UFO03822.5prime
CAGTCGACATGTGGCCAGCCGCCCTGACACGCCTGCTGAGACGCCGGATT
GTGTACATCGTGCTGGTGGTACTGCTGCTCATCTACGGATTCGGACACAT
TTTCGATCGGGACTCGTTTTCCGGCCTGCACTATGACGAGTATGTGGTGC
AGCGCACACGACCGCTCCTGTGGACGCAGCAGCTTCTGGCGCCGGAGGAG
CAGCTCAATCGCACGCGCGGCGATCCCGAGGCACGCTGCCGCAACTCTGT
CCAGGGCCGCCAATGGCTGGCGGACGAGCGAGGATTCGTGTGCCGACGCG
AGGAGGTGCTAACCAACGGCTGCTGCAACCTGGAGCTGCCCGGCATTGGA
TACTACAGCTGCCGCACATGCAATACCAGCACCCACTGTTGCGGTGTTTA
TGAGTATTGCGTCTCCTGCTGCCTGCACCCCGGACAACAGCCGCTGCTGG
AGCGCGTCCTGCAGGCGCCCAACACGCCCAAGTACATCTTCGCCAGCGTG
ACGGACCACTTCGAGCTGTGCCTGGTCAAGTGCCGCACGAACTCGCACTC
CGTGGAGCACGAGAACAAGTACCGCGATCCGGCGGCCAAGCATTGTTATG
GTCTAACCGATGCGCACGAATCCCAGCGTGATGTTGCGCCCCAGGCAAGC
TTTCTAGACCATTCGTTTGGCGCGCGGGGCCCAGGTAAGTGGTCATAATC
ATAATCATAATCATAATCATAATCACAACTAGCCTA
UFO03822.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15643-RB | 1411 | CG15643-RB | 485..1120 | 9..644 | 3180 | 100 | Plus |
| CG15643-RA | 1692 | CG15643-RA | 485..1120 | 9..644 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15570952..15571486 | 644..110 | 2675 | 100 | Minus |
| X | 23542271 | X | 15571563..15571665 | 111..9 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:48:51 has no hits.
UFO03822.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:56:11 Download gff for
UFO03822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15643-RA | 434..1078 | 1..650 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:04 Download gff for
UFO03822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15643-RA | 481..1125 | 1..650 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:26 Download gff for
UFO03822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15643-RA | 481..1125 | 1..650 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:26 Download gff for
UFO03822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15570945..15571485 | 111..649 | 99 | <- | Minus |
| X | 15571564..15571669 | 1..110 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:04 Download gff for
UFO03822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15464978..15465518 | 111..649 | 99 | <- | Minus |
| arm_X | 15465597..15465702 | 1..110 | 96 | | Minus |
