UFO03825.5prime Sequence
700 bp (700 high quality bases) assembled on 2009-02-13
> UFO03825.5prime
CAGTCGACATGGACAGAAGGTGGAATCCAGAAAAAATCGAGGAGCAGAGC
TCCCTCTTGGCAGCGGAATATTCCTCCAGCTCGGGAGCAGCTGCTTCCGG
ATCCGAGGACGAGACGGTCACCACTAGTGGAGCGCTACGCAGCAAAGCAA
AGCTGAGGAAGCGGCAGCTAAGAAATCGCATGCCGCTTCCCAGGATGTTA
AGACGCCTTGGCTGCTACACGCTGAGCGCCTTCCTAATCTGTGGGCTGCT
CCTCGTCTACCTGCCGCTCGTCTACTTGGATGTACACAAGCGTAGTGCTG
GTCTGCCGGATTGGACGTCAGAGACCTCCCGCAGCATAGCTGACTACCTG
GATATCGGGCTCAGTTCTGGCGTCATTGTTCCCAAGGACTTTTGCCGGAA
TAAGACCTTCCTGGTAATCGCCGTATGCACCGGCGTGGACAACTTCATTC
AGCGACATACCATCCGTGAGACCTGGGGCAATACCACCGAGTTCAACTAC
CCAGCGTTTGGAAAGCTCCATGGTCATCTCAAGGGTCACTACCTGCCGCC
ACTGCCGGATCGCTTAAAGATGTACGGGGATTATTTGAGCGGCGAGGGGC
AGTCTCTGACTGCCTCAGTGCGCATTGTTTTCATTGTAGGCCGCCAGAAA
GATGAGGCCATGTTGGGCAATGAGACCCTGAATCGCATTCACATTGAAAT
UFO03825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33145-RB | 2316 | CG33145-RB | 226..922 | 1..698 | 3465 | 99.9 | Plus |
| CG33145-RA | 2249 | CG33145-RA | 226..922 | 1..698 | 3465 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11981971..11982372 | 698..297 | 2010 | 100 | Minus |
| 2R | 25286936 | 2R | 11982436..11982726 | 297..7 | 1455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:44:12 has no hits.
UFO03825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:47 Download gff for
UFO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33145-RB | 222..919 | 1..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:37:59 Download gff for
UFO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33145-RA | 226..923 | 1..700 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:18 Download gff for
UFO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33145-RA | 226..923 | 1..700 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:18 Download gff for
UFO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11981970..11982371 | 298..700 | 99 | <- | Minus |
| 2R | 11982436..11982731 | 1..297 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:37:59 Download gff for
UFO03825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7869475..7869876 | 298..700 | 99 | <- | Minus |
| arm_2R | 7869941..7870236 | 1..297 | 99 | | Minus |
