UFO03828.5prime Sequence
967 bp (921 high quality bases) assembled on 2009-02-13
> UFO03828.5prime
CAGTCGACATGGCGGGACAAAGCAAGCTGATCGATCCACTGTGCATCACT
TGCAAGGAGTTCCAGCACCCATGGACGGACCACTGCGTGAGCGCCACCGC
CGGTATACTACTCTCGGCCACGCCCTACTGCCTGCGGGTCTACACAATAG
TGTACGCCCTGTCCTTGCTGATGCGCCACCGCATTCCAAGTCGCGACGAT
CTGCGCAAGACGCTGCTAGGGATCATCCAATCGACGGCTTTTCTAGTTAC
TAATGCCTACACCTTTATCCTGTACAACTGTGCGCTGCGGCACATGCTCG
GGAGGTACAACTTCTACACAGTGGCCTTTGTGCCCTGCTTTTTGGCCTCG
TTTTCGGCCATTTTGGTTGAGAGACCAGCCCGCCGACCACTACTCACTCT
CTACGTGGCCAATGTGGCCACTGAAGCGCTGTGGAAAATGGCAGAATCGA
GGGGATGGGTGCGCTCCGTTCCTAATGGACAGACACTCATCTTTGGCGTG
AGCATGGCGGCGCTGCTCTACATCTATCGTACTGGCACCACCAAGGATTC
CATCTTCAACATCCTTCGCATTTTCGTGGGCAAGGAGGAGGCGGGGCCGA
TTGTCAAGTCCGGGCCCGCAGTGCCCGGTGAGCAGCCTGCGCCAGACCGC
CGACGTCCCACCGTCAGTTTTTCGACTGTATCCGACTGGGTGCGCGTGTA
CAGCAATCTCATTCGCGCAAAACACGAAAGCTGTCGGCATCAACAGAGCT
GCATTGGATACTCCCTGATGGGTGGAATTAACCCTTTGTGGGTGGAGTGG
GTCTTCAGGTGCCCTTAACCTGGCATGAACGTCAACGATTACGCTGGAAA
ATGCCGGAGAGATGATCTTCACGTGTAATCTACACTGGGCATCTCATGGC
AGCTTTCATTCTCTATAGACTGTGTCTGCCGCTGCGGACATTTAACCGGA
CCATCCGATTTCATTCG
UFO03828.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11737-RC | 1731 | CG11737-RC | 144..1109 | 9..949 | 4175 | 97 | Plus |
| CG11737-RB | 1800 | CG11737-RB | 213..1178 | 9..949 | 4175 | 97 | Plus |
| CG11737-RA | 2126 | CG11737-RA | 539..1504 | 9..949 | 4175 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8519620..8520449 | 9..835 | 3985 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:09:34 has no hits.
UFO03828.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:59:45 Download gff for
UFO03828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11737-RA | 534..1432 | 1..884 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:56 Download gff for
UFO03828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11737-RB | 204..1102 | 1..884 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:38 Download gff for
UFO03828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11737-RA | 530..1428 | 1..884 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:38 Download gff for
UFO03828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8519611..8520509 | 1..884 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:56 Download gff for
UFO03828.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4345333..4346231 | 1..884 | 97 | | Plus |
